Chlorocebus sabaeus (green monkey): 103240758
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Entry
103240758 CDS
T04361
Symbol
SCAF8
Name
(RefSeq) SR-related CTD associated factor 8
KO
K13191
RNA-binding protein 16
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csab03021
]
103240758 (SCAF8)
03041 Spliceosome [BR:
csab03041
]
103240758 (SCAF8)
Transcription machinery [BR:
csab03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103240758 (SCAF8)
Spliceosome [BR:
csab03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103240758 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103240758
NCBI-ProteinID:
XP_008005845
Ensembl:
ENSCSAG00000013430
UniProt:
A0A0D9RLU5
LinkDB
All DBs
Position
13:82270422..82448887
Genome browser
AA seq
1292 aa
AA seq
DB search
MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTTAMSNTPG
TPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHSEEP
KKEIPTSQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFG
SEHSASPSQGSSQQHFLEPEVNLDDSIDIQQQDMDIDEGQDGVEEEVFEQEAKKVAVRSR
SRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKER
QKKGLPPIRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCM
VHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVD
DLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVA
MLQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPP
PVVPPPAIPPVVPTSLVQPSLSMTPETVKDVGFGSLVIPGGSVASNLATSALPAGNVFNA
PTKQAEPEEKVPHLIDHQISSGENTRSVIPNDISSNAAILGGQPPNVTSNSGILGVQRPN
VSSNSEILGVRPSNVSSSSGIIGAQPPNILNNSGILGIQPPSVSSGSGLLGVLPPNIPNN
SGLVGVQPPNVPNTSGLLGTQPPAGPQNLPPLSIPNQRMPTMPMLDIRPGLIPQAPGPRF
PLIQPGIPPQRGIPPPSVLDSALHPPPRGPFPPGDIFSQPERPFLAPGRQSIDNVANPEK
RIPLGNDNIQQEGDRDYRFPPIETRESISRPPPVDVRDVVGRPIDPREGPGRPPLDGRDH
FGRPPVDIRENLVRPGIDHLGRRDHFGFNPEKPWGHRGDFDEREHRVLPVYGGPKGLHEE
RGRFRSGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLG
RDRIQNTWVPPPHARVFDYFEGATSQRKGDNVPQVNGENTERHAQPPPIPVQNDPELYEK
LTSSNEINKEKSDTVADIESEPVVESTETEGT
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaagaccttcaatagcgaggattgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatactgtattccctgaatgactataaacca
cccatttcgaaagcaaaaatgacccaaattactaaggcagccatcaaagctattaagttc
tataaacatgtggtacagagtgttgagaagtttattcagaaatgtaaaccagaatacaaa
gtacctggactttatgttattgactccattgtgcgacaatccagacatcagtttggtcaa
gaaaaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaattta
tatcgttgccctggggatgacaagagtaaaatagtgagagtactaaacttatggcagaag
aataatgtatttaagagtgagattattcagcctcttttggatatggcagctgggattcca
cctcctgttgtcacacctgttttggccagcactaccactgctatgagcaatactccagga
actcctgtgacacctgttactccggccaatgtggtccaaggcttacctgatccgtgggta
tctcagataacaaatacagatacactcgcggctgtggctcagatcttgcaaagtcctcaa
ggccagcagcttcaacaattaatacaaaccttacagatacaacaacagaagccccagcct
tccattctgcaggccctagatgctggtcttgtcgttcagttacaagctcttacggcacaa
cttacagctgcagctgcggctgccaacactcttactcccttagaacagggagtctccttt
aacaagaagttgatggataggtttgattttggggaagattctgagcatagtgaagaaccc
aaaaaagaaattccaacttcacaactttctcacgtttcagaatctgtgaacaattccatt
tttcatcagatagcagaacaactacaacagcaaaacctagaacatctcagacagcaactc
ttggagcagcaacagcctcaaaaggccactcctcaggatagtcaggaaggaacatttggg
tcagagcattcagcgtcaccatcacaagggagtagtcagcagcattttcttgaacctgaa
gtcaatttggatgattccatagatattcagcagcaggatatggatatagatgaagggcaa
gatggagtggaagaggaggtctttgaacaagaagctaagaaagtggcagttcgctcaaga
tcaagaacacattcacgatctcgttcaagatcaccaagaaaacgaaggtctaggtcacgg
tctggctctagaaagcgtaaacacagaaagcgatcacgctcccgctcaagagaaagaaag
aggaaatcatcacggtcgtattcaagtgaaaggagagccagagaaagggaaaaagaaaga
cagaaaaagggattacctccaattagatctaaaacactgagtgtatgtagtactactctc
tgggttgggcaagtggacaagaaggcaacacagcaagacttaaccaacctgtttgaagag
tttggacaaattgaatccattaatatgattcctcccaggggctgtgcttatgtctgcatg
gttcatcgacaagatgcatttcgagctcttcagaaactcagttctggatcgtataaaatt
gggtccaaggtcattaagatcgcttgggctttaaacaaaggtgtaaaaacagaatacaaa
caattctgggatgtggatcttggagttacatatataccatgggaaaaagttaaagtggat
gacttggaaggttttgcagaaggaggcatgattgatcaggagactgtaaatactgagtgg
gaaactgtgaaaagctcagaacctgttaaagagacggtccagacaactcagagcccaact
ccagttgaaaaggagacagtggtcacaacccaggcagaggttttccctcctcctgttgct
atgttgcagattccagtggcgccagccgtgcctacagttagtttagtcccaccagcattt
cctgtgtcgatgccggttcctcctcctggatttagtccaattcctccacctcctttttta
cgagcaagttttaacccttcacaaccaccacctggtttcatgccgcctccagttccccca
cctgttgtgccaccccctgcaattccaccagtagtaccaacatctttagtgcagccgtca
ttatccatgaccccggaaactgtgaaagatgttggatttggtagccttgttataccgggt
ggctctgttgccagcaatcttgctacttccgctctgccagctggaaatgtttttaatgct
ccaactaaacaggcagagcctgaagaaaaagtacctcatctgatagaccaccagatttct
tctggtgaaaacaccagatcagtgattccaaatgatatttcaagtaatgctgcaatttta
ggaggacagccaccaaatgtgacaagcaattctggaattctgggagtccaaagaccaaat
gtatcaagtaattctgaaattcttggggtccggccatctaatgtttccagtagttctggg
attattggagcccaaccaccaaatattctaaataactctggaatattgggaatacagcca
cccagtgtgtcaagtggttctggacttttgggagtgctacccccaaatatacctaacaat
tctggacttgtaggagtacagccaccaaatgttccaaatacttcgggacttctgggaaca
cagccaccagctggacctcaaaacttaccccctttaagtatccctaatcaaaggatgccc
acaatgccaatgttagacattcgtccaggactaataccacaggcacctgggccaagattc
cctttaatacagcctggaattccaccccagcggggaatcccacccccatcggtacttgat
tcagctcttcatccaccaccccgtggaccttttcctccaggagatatttttagtcagcca
gaaagaccttttttagctcctggaagacaaagcatagacaatgttgctaacccagaaaaa
aggataccacttgggaatgataacattcaacaggaaggagatagagattaccggtttccc
cctatagaaaccagggaaagcattagtagacctccccctgtggatgttagagatgtggtt
gggcggcctatagatccaagagaaggtcctggacggcctccactagatggtagggatcat
tttggaagacctcctgtagatataagagagaatcttgtgaggccaggtatagatcatctt
ggtcgaagagaccactttggctttaatcctgagaagccctgggggcatagaggagatttt
gatgagagagagcatcgggttctaccggtctatggtggtccaaaaggcttacatgaagaa
agaggtagatttcggtctggaaactatcgatttgatcctagaagtggtccttggaaccga
ggatttggacaagaagttcacagagattttgatgaccgcagaagaccctgggagaggcaa
agggatagggatgacagagattttgatttctgcagagaaatgaacggaaatcgtcttgga
cgagacagaattcaaaacacttgggttccccctcctcatgctcgggtttttgattatttt
gaaggggccacttctcaacgaaaaggtgataatgtgcctcaggttaatggtgaaaataca
gagagacatgctcagccaccacctataccagtacagaatgatcctgaactttatgaaaaa
ctgacatcttcaaatgaaataaacaaggagaagagtgacacagttgctgatatagaaagt
gaaccagtggtagaaagcacagaaactgaggggacataa
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