Chlorocebus sabaeus (green monkey): 103241068
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Entry
103241068 CDS
T04361
Symbol
SNRNP200
Name
(RefSeq) small nuclear ribonucleoprotein U5 subunit 200
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103241068 (SNRNP200)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csab03041
]
103241068 (SNRNP200)
Enzymes [BR:
csab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103241068 (SNRNP200)
Spliceosome [BR:
csab03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103241068 (SNRNP200)
Complex C
U5 SnRNP specific factors
103241068 (SNRNP200)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
SNRNP200_wHTH
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
AAA_30
PhoH
SWI2_SNF2
DUF603
Motif
Other DBs
NCBI-GeneID:
103241068
NCBI-ProteinID:
XP_008006160
Ensembl:
ENSCSAG00000017369
UniProt:
A0A0D9RXR5
LinkDB
All DBs
Position
14:complement(693873..724226)
Genome browser
AA seq
2136 aa
AA seq
DB search
MADVTARSLQYEYKANSNLVLQADRSLIDRTRRDEPTGEVLSLVGKLEGTRMGDKAQRTK
PQMQEERRAKRRKRDEDRHDINKMKGYTLLSEGIDEMVGIIYKPKTKETRETYEVLLSFI
QAALGDQPRDILCGAADEVLAVLKNEKLRDKERRKEIDLLLGQTDDTRYHVLVNLGKKIT
DYGGDKEIQNMDDNIDETYGVNVQFESDEEEGDEDVYGEVREEASDDDMEGDEAVVRCTL
SANLVASGELMSSKKKDLHPRDIDAFWLQRQLSRFYDDAIVSQKKADEVLEILKTASDDR
ECENQLVLLLGFNTFDFIKVLRQHRMMILYCTLLASAQSEAEKERIMGKMEADPELSKFL
YQLHETEKEDLIREERSRRERVRQSRMDTDLETMDLDQGGEALAPRQVLDLEDLVFTQGS
HFMANKRCQLPDGSFRRQRKGYEEVHVPALKPKPFGSEEQLLPVEKLPKYAQAGFEGFKT
LNRIQSKLYRAALETDENLLLCAPTGAGKTNVALMCMLREIGKHINMDGTINVDDFKIIY
IAPMRSLVQEMVGSFGKRLATYGITVAELTGDHQLCKEEISATQIIVCTPEKWDIITRKG
GERTYTQLVRLIILDEIHLLHDDRGPVLEALVARAIRNIEMTQEDVRLIGLSATLPNYED
VATFLRVDPAKGLFYFDNSFRPVPLEQTYVGITEKKAIKRFQIMNEIVYEKIMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGLFLREGSASTEVLRTEAEQCKNLELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADKHIQVLVSTATLAWGVNLPAHTVIIKGTQVYSPEKGR
WTELGALDILQMLGRAGRPQYDTKGEGILITSHGELQYYLSLLNQQLPIESQMVSKLPDM
LNAEIVLGNVQNAKDAVNWLGYAYLYIRMLRSPTLYGISHDDLKGDPLLDQRRLDLVHTA
ALMLDKNNLVKYDKKTGNFQVTELGRIASHYYITNDTVQTYNQLLKPTLSEIELFRVFSL
SSEFKNITVREEEKLELQKLLERVPIPVKESIEEPSAKINVLLQAFISQLKLEGFALMAD
MVYVTQSAGRLMRAIFEIVLNRGWAQLTDKTLNLCKMIDKRMWQSMCPLRQFRKLPEEVV
KKIEKKNFPFERLYDLNHNEIGELIRMPKMGKTIHKYVHLFPKLELSVHLQPITRSTLKV
ELTITPDFQWDEKVHGSSEAFWILVEDVDSEVILHHEYFLLKAKYAQDEHLITFFVPVFE
PLPPQYFIRVVSDRWLSCETQLPVSFRHLILPEKYPPPTELLDLQPLPVSALRNSAFESL
YQDKFPFFNPIQTQVFNTVYNSDDNVFVGAPTGSGKTICAEFAILRMLLQSSEGRCVYIT
PMEALAEQVYMDWYEKFQDRLNKKVVLLTGETSTDLKLLGKGNIIISTPEKWDILSRRWK
QRKNVQNINLFVVDEVHLIGGENGPVLEVICSRMRYISSQIERPIRIVALSSSLSNAKDV
AHWLGCSATSTFNFHPNVRPVPLELHIQGFNISHTQTRLLSMAKPVYHAITKHSPKKPVI
VFVPSRKQTRLTAIDILTTCAADIQRQRFLHCTEKDLIPYLEKLSDSTLKETLLNGVGYL
HEGLSPMERRLVEQLFSSGAIQVVVASRSLCWGMNVAAHLVIIMDTQYYNGKIHAYVDYP
IYDVLQMVGHANRPLQDDEGRCVIMCQGSKKDFFKKFLYEPLPVESHLDHCMHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRMTQNPNYYNLQGISHRHLSDHLSELVEQTLSDLEQSK
CISIEDEMDVAPLNLGMIAAYYYINYTTIELFSMSLNAKTKVRGLIEIISNAAEYENIPI
RHHEDNLLRQLAQKVPHKLNNPKFNDPHVKTNLLLQAHLSRMQLSAELQSDTEEILSKAI
RLIQACVDVLSSNGWLSPALAAMELAQMVTQAMWSKDSYLKQLPHFTSEHIKRCTDKGVE
SVFDIMEMEDEERSALLQLTDSQIADVARFCNRYPNIELSYEVVDKDSIRSGGPVVVLVQ
LEREEEVTGPVIAPLFPQKREEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATG
AHNYTLYFMSDAYMGCDQEYKFSVDVKEAETDSDSD
NT seq
6411 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtaaccgcccgtagtctgcagtacgagtacaaggcgaactcgaatcttgtg
cttcaagctgaccgttctctcattgaccggacccgccgggatgaacccacaggagaggtg
ctgtcccttgttgggaagctggagggcacccgtatgggagacaaggctcaacggaccaaa
ccgcagatgcaggaggaaagaagagccaagcgaagaaagcgtgatgaggaccggcatgac
atcaacaagatgaagggttacactctgctgtcggagggcattgatgagatggtgggtatc
atctacaagcccaaaactaaggagacccgcgagacctatgaggtgctgctcagcttcatc
caggctgctcttggggaccagccacgtgatatcctttgtggggcagctgatgaggttcta
gctgttctaaagaatgaaaagctgcgggacaaggaaaggcgaaaggagattgacctgctg
ctgggtcaaacagatgataccagataccatgtgctagtgaacctgggaaaaaagatcaca
gactatggtggagacaaggaaatccaaaatatggatgacaacattgatgagacatacggt
gtgaatgtacagtttgagtctgatgaggaggaaggtgatgaagatgtgtatggggaggtt
cgagaagaggcatctgatgatgacatggaaggggatgaggctgtcgtgcgctgcaccctc
tcggctaatctcgtggcctcaggtgaactgatgagttccaagaagaaggatttgcaccct
cgggatattgatgcattttggctacagcggcagctcagtcgtttctatgatgatgccatc
gtgtcgcagaagaaggcagatgaagtattggagattttgaagacggccagtgacgatcgg
gaatgtgagaaccagctggttctgctgcttggtttcaacacctttgatttcattaaagtg
ttgcggcagcacaggatgatgattttatactgtaccttgctggccagtgcacaaagtgaa
gctgaaaaggaaaggattatgggaaagatggaagctgacccagagctatccaagttcctc
taccagctccacgaaaccgagaaggaggatctgatccgagaggagagatcccggagagag
cgagtgcgtcagtctcgaatggacacagatctggaaaccatggatctcgaccagggtgga
gaggcactggctccacggcaggttctggacttggaggacctggtatttacccaagggagc
cactttatggccaataagcgctgtcagcttcctgatgggtccttccgtcgccagcgtaag
ggctacgaagaggtgcatgtgcctgctctgaagcccaagccctttggctcagaagaacaa
ctgcttccggtggaaaagcttccaaagtatgcccaggctgggtttgagggcttcaaaaca
ctgaatcggatccagagtaagctctaccgtgctgccctcgagacggatgagaatctgctg
ctgtgtgctcccactggtgctgggaagaccaacgtggccctgatgtgcatgctccgagag
atcgggaaacacatcaacatggacggcaccatcaatgtggatgacttcaagattatctac
attgcccccatgcgctccttggtgcaggagatggtgggcagctttggaaagcgtctggcc
acttacggcatcactgttgctgaactgactggggaccaccagctgtgcaaagaagagatc
agtgccactcagatcatcgtctgcacccccgagaagtgggacatcatcacccgcaagggt
ggcgagcgcacctacacccagctggtgcggctcatcattctggatgagatccatcttctc
cacgatgacagaggtcctgtcttagaagctttggtggccagggccatccgaaacattgag
atgacccaggaggatgtccgactcattggtctcagtgccaccctacccaactatgaagac
gtagccacctttctacgtgttgaccctgccaagggtctcttttactttgacaacagcttc
cgtccagtgcctctggaacagacgtacgtgggtatcacagagaaaaaagctatcaagcgt
ttccagatcatgaatgaaatcgtctatgaaaaaatcatggaacatgctgggaaaaatcag
gtgctggtgtttgtccactcccggaaggagactggaaagacggccagggccatccgggac
atgtgcctagagaaggacactctgggtctgtttctgagggagggctcagcctccacggaa
gtcctgcgaacagaagcggagcagtgcaagaacctagagctgaaggatcttctgccttac
ggctttgctattcatcatgcaggcatgaccagggttgaccgaacactcgtggaggatctt
tttgctgataaacatattcaggttttagtttccacagcaactctagcttggggtgtgaat
ctccctgcacatacagtcatcatcaaaggcacccaggtgtacagtccagagaaggggcgt
tggacagaactgggagcactggacattctgcagatgctgggacgtgctggaagaccccag
tatgacaccaagggcgaaggcatcctcatcacgtctcatggggagctgcagtactacctg
tccctcctcaaccaacagcttcctattgagagccagatggtttcaaagcttcctgacatg
ctcaacgcagaaatcgtgctggggaatgtccagaatgccaaggacgcagtgaactggctg
ggctatgcctacctgtatatccgaatgctgcgatccccaactctctatggcatctctcat
gatgacctcaagggggatcccctgctggaccagcgccgactagatctggttcacacggct
gccctgatgctggacaagaacaatctggtcaagtacgacaagaagacaggcaacttccag
gtgacagaactgggccgtatagccagccactactacatcaccaatgacaccgtgcagact
tacaaccagctgctgaagcccaccctgagtgagattgagcttttcagagtcttctcgtta
tcctctgagttcaagaacatcacagtgagagaggaggagaagctggagctgcagaagttg
ctggagagggtgcccatccctgtaaaagagagcatcgaggaacccagcgccaagatcaat
gttcttctgcaagccttcatctcacagctgaaattggagggcttcgccctgatggctgac
atggtgtacgtcacacagtcggctggccggttgatgcgagcgatatttgaaattgtcctg
aaccgaggttgggcacagctgacagacaagacgctgaacctctgcaagatgatcgacaaa
cgcatgtggcagtccatgtgtcctctgcgccagttccggaaactccctgaggaagtagtg
aagaagattgagaagaagaatttcccctttgagcgtctgtacgacctgaatcataatgag
atcggggagcttatccgcatgccaaagatggggaagaccatccacaaatatgtccatctg
tttcccaagttggagctgtcggtgcacctgcagcctatcacacgctccaccctgaaggtg
gagctgactatcacgccggacttccagtgggatgaaaaggtgcatggttcatccgaggct
ttctggattctggtggaggacgtggacagcgaggtgattctgcaccatgagtattttctc
ctgaaggccaagtatgcgcaggacgagcacctcattacgttcttcgtgcctgtctttgag
ccgctgccccctcagtacttcatccgagtggtgtctgaccgctggctctcttgtgagacc
cagctgcccgtctccttccggcacctgatcttgccggagaagtacccacctccaaccgag
cttttggacttgcagcccttgcccgtgtctgctctgagaaacagtgcctttgagagtctt
taccaagataaatttcctttcttcaatcccatccagacccaggtgtttaacaccgtgtac
aacagtgacgacaacgtgtttgtgggggcccccacgggcagtgggaagaccatttgtgca
gagtttgccatcctgcggatgctgctgcagagctcggaggggcgctgtgtgtacatcacc
cccatggaggccctggcagagcaggtatacatggactggtatgagaagttccaggatagg
ctcaacaagaaggtggtactcctgacgggagagaccagcacagacctgaagctgctgggc
aaagggaacattatcatcagcacccccgagaagtgggacatactttcccggcggtggaag
cagcgcaagaacgtgcagaacatcaacctcttcgtggtggatgaggtccaccttatcggg
ggcgagaatgggcctgtcttagaagtgatctgctcccgaatgcgctacatctcctcccag
attgagcggcccattcgcattgtggcactcagctcttcgctctccaatgccaaggatgtg
gcccactggctgggctgcagcgccacctccaccttcaacttccaccctaatgtgcgtccc
gtccccttggagctgcacatccagggcttcaacatcagccatacacaaacccgcctgctc
tccatggccaagcctgtgtaccatgctatcaccaagcactcgcccaagaagcctgtcatt
gtctttgtcccgtctcgcaagcagacccgcctcactgccattgacatcctcaccacgtgt
gcagcagacatccagcggcagaggttcttgcactgcaccgagaaggatctgattccgtac
ctggagaagctaagtgacagcacgctcaaggaaacgctgctgaatggggtgggctacctg
catgaggggctgagccccatggagcggcgcctagtggagcagctcttcagctcaggggct
atccaggtggtggtggcttctcggagtctctgctggggcatgaacgtggctgcccacctg
gtaatcatcatggacacccagtactacaatggcaagatccacgcctatgtggattacccc
atctacgacgtgcttcagatggtgggtcacgccaaccgccctttgcaggacgatgaggga
cgctgcgtcatcatgtgtcagggctccaagaaggatttcttcaagaagttcttatatgag
ccattgccagtggagtctcacctggaccactgtatgcatgaccacttcaatgctgagatc
gtcaccaagaccattgagaacaagcaggacgctgtggactacctcacctggacctttctg
taccgccgcatgacacagaaccccaattactacaacctgcagggcatctcccatcgtcac
ttgtccgaccacttgtcagagctggtggagcagaccctgagtgacctggagcagtccaag
tgcatcagcatcgaggacgagatggatgtggcacctctgaacctgggcatgattgctgcc
tactattacatcaactacaccaccattgagctcttcagcatgtccctcaatgccaagacc
aaggtgcgagggcttatcgagatcatctccaatgcagcagagtatgagaacattcccatc
cggcaccatgaagacaacctcctgaggcagttggctcagaaggtcccccacaagctgaat
aaccctaagttcaatgatccgcacgtcaagaccaacctgctgctgcaggctcacctgtcc
cgcatgcagctgagtgctgagttgcagtcagatacggaggaaatccttagtaaggcaatc
cggcttatccaggcctgtgtggatgtcctctccagcaatgggtggctcagccctgctctg
gcagccatggaactggcccagatggtcacccaagccatgtggtccaaggactcatacctg
aagcagctgccacacttcacctctgagcatatcaaacgctgcacagacaagggagtggag
agtgttttcgacatcatggagatggaggatgaagaacggagcgcgttgctccagctgacc
gacagccagattgcagatgtggcccgcttttgtaaccgctaccctaacatcgagctgtct
tatgaggtggtggataaggacagcatccgcagtggcgggccagttgtggtgctggtgcag
ctggagcgagaggaggaagtcacaggccctgtcattgcgcccctcttcccacagaaacgt
gaagagggctggtgggtggtgattggagatgccaagtccaatagtctcatctccatcaag
aggctgaccctccagcagaaggccaaggtgaagttagactttgtggccccagccactggc
gcccacaactacactctgtacttcatgagtgacgcttacatgggatgtgaccaggagtac
aaattcagcgtggatgtgaaagaagctgagacggatagtgattcagattga
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integrated database retrieval system
