Chlorocebus sabaeus (green monkey): 103241666
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Entry
103241666 CDS
T04361
Symbol
NPHP3
Name
(RefSeq) nephrocystin 3
KO
K19360
nephrocystin-3
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csab03037
]
103241666 (NPHP3)
Cilium and associated proteins [BR:
csab03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
103241666 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
NPHP3
TPR_10
TPR_1
TPR_8
TPR_7
TPR_2
TPR_MalT
TPR_16
TPR_19
TPR_17
NPHP3_N
TPR_3
TPR_11
TPR_6
AAA_16
KAP_NTPase
NACHT
ANAPC3
AAA_22
DUF2225
AAA_19
AAA_14
T2SSE
Viral_helicase1
ARM_TT21_4th
FliD_C
Motif
Other DBs
NCBI-GeneID:
103241666
NCBI-ProteinID:
XP_008007305
Ensembl:
ENSCSAG00000010607
LinkDB
All DBs
Position
15:57550878..57629106
Genome browser
AA seq
1357 aa
AA seq
DB search
MGTASSLVSPAGGEVIEDTYGAGGGEACEIPVEVKPKARLLRNSFRRGAGAAAGAGPGSL
PRGAGAGGLLGASFKSTGSSVPELEYAAAEYERLKKEYEIFRVSKNQELLSMGRREAKLD
TENKRLRAELQALQKTYQKILREKESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKE
NEIQDLLRAKRELESKLQRLQAQGIQVFDPGESDSDDNCTDVTAAGTQCEYWTGGALGSE
PSIGSMIQLQQSFRGPEFAHSSIDVEGPFANVNRDDWDIAVASLLQVTPLFSHSLWSNTV
RCYLIYTDETQPEMDLFLKDYSPKLKRMCETMGYFFHAVYFPIDVENQYLTVRKWEIEKS
SLVILFIHVTLPSLLLEDCEEAFLKNPEGKPRLIFHRLEDGKVSSDSVQQLIDQVSNLNK
TNKAKIIDHSGDPAEGVYKTYICVEKIIKQDILGFENTDLETKDLGSEDSIPEEDDFGDV
LWDIHDEQEQMETFQQASSSAHELGFEKYYQRLNDLVAAPAPIPPLLVSGGPGSGKSLLL
SKWIQLQQKNSPNTLILSHFVGRPMSTSSESSLIIKRLTLKLMQHSWSVSALTLDPAKLL
EEFPRWLEKLSARHQGSIIIVIDSIDQVQQVEKHMKWLIDPLPVNVRVIVSVNVETCPPA
WRLWPTLHLDPLSPKDAKSVIIAECHSVDIKLSKEQEKKLERHCRSATTCNALYVTLFGK
MIASAGRAGNLDKILHQCFQCQDTVSLYRLVLHSIQESMANDVDKELMKQILCLVNVSHN
GVSESELMELYPVMSWTFLTSLIHSLYKMCLLTYGCGLLRFQHLQAWETVRLEYLEDPTI
TSSYRQKLINYFTLQLSQDRVTWRSADELPWLFQQQGSKQKLHDCLLNLFVSQNLYKRGH
FAELLSYWQFVGKDKSAMATEYFDSLKQYEKNCEGEENMSCLADLYETLGRFLKDLGLLS
QAVVPLQRSLEIRETALDPDHPRVAQSLHQLASVYVQWKKFGNAEQLYKQALEISENAYG
TDHPYTARELEALATLYQKQNKYEQAEHFRKKSFKIRQKAIKKKGNLYGFALLRRRALQL
EELTLGKDTPDNARTLNELGVLYYLQNNLETADQFLKRSLEMRERVLGPDHPDCAQSLNN
LAALCNEKKQYDKAEELYERALDIRRRALAPDHPSLAYTVKHLAILYKKMGKLDKAVPLY
ELAVEIRQKSFGPKHPSVATALVNLAVLYSQMKKHVEALPLYERALKIYEDSLGRMHPRV
GETLKNLAVLSYEGGDFEKAAELYKRAMEIKEAETSLLGGKAPSHHSSSGDTFSLKTTHS
PHVFLSKDKGKCXSNLLSPEGLSNICAQEKTTRFTSS
NT seq
4074 nt
NT seq
+upstream
nt +downstream
nt
atggggaccgcctcgtcgctcgtgagccccgcgggcggggaggtgatcgaggacacgtac
ggggcgggcggcggcgaggcttgcgagatcccggtagaggtgaagcccaaggcccgcctg
ctacgcaactcgttccgccgaggcgcgggggcggcggcgggggccgggccggggtcgctt
ccccgcggggcaggcgcgggcgggctgctgggggccagcttcaagtccaccggctcgtcg
gtgcccgagctggagtacgcggcggccgagtacgagcggctcaagaaggagtacgagatc
ttccgcgtcagcaagaaccaggagttgttgtccatgggccgccgcgaggccaagctggac
acagagaacaagcggctgcgggccgaactgcaggcacttcaaaaaacataccagaagata
cttcgagaaaaagaaagtgctttagaagcaaaataccaagcaatggagagagcagcaaca
tttgaacatgacagagataaagttaaaaggcaattcaagatttttagagagaccaaagaa
aatgaaattcaggacttactgagggccaagagggagttggagagcaaacttcagaggcta
caggctcagggcatccaagtatttgatcctggggagtctgattcagatgacaactgtaca
gatgtcactgctgctggaacccaatgtgaatattggactggcggagccttgggaagtgaa
ccttccataggaagcatgatccagcttcagcagtccttcagaggccctgagtttgcccat
agttctatagatgtggaaggaccctttgcaaatgttaacagagatgattgggatattgct
gtagctagtttattacaagttactcctctgttttcacattctctgtggagtaacactgtc
agatgttacctcatttatacagatgaaacccagcctgagatggatcttttccttaaggac
tattcacctaaacttaagagaatgtgcgagacaatgggatattttttccatgctgtttat
tttccaatagatgttgaaaatcaatacctcactgtaagaaaatgggaaattgagaaaagt
tctttagttattttatttattcacgtaacattaccaagccttttattggaagactgtgaa
gaagcttttctgaaaaaccctgaaggaaaacctcgattaatctttcatcgtttggaagat
ggaaaagtcagttctgactctgtccagcaattgattgatcaagtttctaatctaaacaag
accaacaaagccaagatcattgatcactcaggagatcctgcagaaggagtatataaaact
tatatttgtgtagaaaagattattaaacaggatatactgggttttgagaacacagacctg
gagactaaggatttgggcagtgaggattccattccagaagaagatgattttggtgacgtt
ctgtgggacatacatgatgaacaagagcaaatggaaacttttcagcaggcttctagttca
gcccatgagttgggatttgagaaatattaccagcgccttaatgatctagtggcagcacca
gccccgatcccacctcttctggtgtctggaggaccaggttctggaaagtctcttctttta
tccaagtggattcaattacaacagaagaattcccccaacacactcattctttcccatttt
gtgggaaggcccatgtcaaccagctcagagtcctccttgattattaaacgactaactcta
aagttgatgcagcactcttggtcagtctctgctctgacactggatcctgctaagcttctg
gaagaatttccacgttggctggaaaaactgtctgctcgtcatcaaggcagcatcatcatt
gttattgattctatagatcaagttcagcaagttgaaaaacacatgaaatggctgatagat
ccactgccagtgaatgtaagagtaattgtttctgtgaatgtagaaacatgccctccagca
tggaggttgtggcctacacttcatcttgatcccttaagtccaaaagatgcaaaatctgtt
ataattgcagaatgccactctgtagacattaaactgagtaaagagcaggagaagaagctg
gaacgacactgtcgttctgctacaacctgcaatgccctttatgtcacccttttcggcaaa
atgatcgcgagtgctgggagagcaggcaatttagataaaatccttcatcagtgtttccag
tgtcaagatactgtttcattatatagactcgttctgcactctatccaggagtccatggca
aatgatgtggataaagagctaatgaagcagattctctgccttgtcaacgttagtcacaat
ggtgtgagtgaatcagaactgatggaactctatcctgtgatgtcctggactttcttgacc
tcccttattcacagtttatacaaaatgtgtttgttgacttatggttgtggcttgctcagg
tttcaacatctgcaggcttgggaaacagtgagactggagtacctggaagaccccaccatt
acttcttcatacaggcaaaagctaatcaactatttcaccttgcagctaagtcaggacaga
gtgacttggagaagtgcagatgaactcccgtggctttttcagcagcagggaagtaaacag
aagctgcatgattgccttcttaatctctttgtgtctcaaaacctttataaaaggggacac
tttgctgagttgctgagttattggcagtttgttggcaaagacaaaagtgcaatggcaaca
gaatacttcgattcattgaagcagtatgagaaaaactgcgaaggcgaggagaacatgagt
tgcttagctgatctttatgaaaccttggggcgatttctcaaggatctaggccttctcagt
caggctgtagtacctttgcagaggtctttagagattcgagaaacagctttagatcccgat
cacccaagagtagcccagtccctccaccaactagcaagtgtatacgtgcagtggaagaag
tttggcaatgcagaacaactgtataaacaggcattagaaatctcagaaaacgcttatggt
acggaccatccatatactgctcgtgaactggaggcacttgcaactttgtaccagaaacaa
aataaatatgaacaagctgaacattttaggaaaaaatcctttaaaattcgtcagaaagct
ataaagaaaaaaggcaacttgtatggatttgcccttttacgtagacgggctctacagtta
gaagagcttacattaggtaaggacacacctgataatgctcggaccctcaatgaactgggt
gttctctactatcttcaaaataacctggaaacagctgaccagtttctgaagcgttcctta
gaaatgagggagcgagttctaggaccggatcaccctgactgtgctcagtctttgaataat
ctggcagctctatgcaatgaaaagaaacagtatgataaagcagaagaactttatgaaaga
gctttagatattcggagacgtgcattagctcctgatcacccttctttggcatatacagtg
aagcatcttgccatcttgtataagaaaatggggaaacttgacaaagctgtacctttgtat
gaattggctgttgaaattcgacagaaatcttttggcccaaagcaccctagtgtagctact
gctttggtgaacttagctgttctttatagccaaatgaaaaaacatgttgaagctttgcca
ttatatgaaagagcattaaagatttacgaagatagcctgggtcggatgcatcctcgagtt
ggagaaacattgaaaaatttagctgtgcttagctatgaaggaggagattttgaaaaagct
gctgaattatacaaaagggcaatggaaataaaagaagcagaaacatcactcttgggtgga
aaagctccttcacaccattcatcaagtggagacacatttagcttaaaaacaactcattct
cctcatgttttcctcagcaaggacaaaggtaaatgctaatccaaccttttatctccagaa
gggctttcaaacatatgtgctcaggaaaaaaccaccaggttcacttcttcctaa
DBGET
integrated database retrieval system