Chlorocebus sabaeus (green monkey): 103241700
Help
Entry
103241700 CDS
T04361
Name
(RefSeq) collagen alpha-4(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab04151
PI3K-Akt signaling pathway
csab04510
Focal adhesion
csab04512
ECM-receptor interaction
csab04820
Cytoskeleton in muscle cells
csab04974
Protein digestion and absorption
csab05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103241700
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103241700
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103241700
09142 Cell motility
04820 Cytoskeleton in muscle cells
103241700
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103241700
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
103241700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csab04147
]
103241700
00536 Glycosaminoglycan binding proteins [BR:
csab00536
]
103241700
Exosome [BR:
csab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103241700
Glycosaminoglycan binding proteins [BR:
csab00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103241700
Hyaluronan
Extracellular matrix or blood plasma proteins
103241700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
DUF1194
VWA_CoxE
SRPRB
DUF2201
fvmX1
Motif
Other DBs
NCBI-GeneID:
103241700
NCBI-ProteinID:
XP_008007362
Ensembl:
ENSCSAG00000010190
LinkDB
All DBs
Position
15:complement(59894622..59995003)
Genome browser
AA seq
2348 aa
AA seq
DB search
METWKIFWGIILLETGFGFIKSQSIVCREASLGDVVFLVDANINPQHARSVRNFLYILVN
SFNVSSKTIRVGLAQYSDVPHSEFLLSTYHRKADVLRHIRHFKFKPGGKKMGLALKFILD
HHFQEASGSRASQGVPQIAVVISSGPVEDHVHGPAEALRRAGILLYAIGVRDAVWAELRE
IASSPQENFTSFVPYFSGLSNLAQKLRQELCDMLAKAAPRVDHVSPACREAALADIVFLV
DSSTSIGPQNFQKVKNFLYSVVLGLDISSDHVRVGLAQYNDNIYPAFQLNQHPLKSMVLE
QIQNLPYRTGGTNTGSALEFIRTNYLTEESGSRAKDRVPQIVILVTDGESNDEVQEVADR
LKEDGVVVYVVGVNVQDVQELQKIASEPFEKFLFNTENFNILQDFSGSILQTLCSAVEGK
IKEFIKAYADVVFLADASQDTSRASFQRMQNFLSRVVGMLEVGRDKYQIGLAQYGDQGHT
EFLLNTYKNQNEMIAHIHERFVPLGGSRRTGKALQYLLQTFFQEKAGSRFLQGIPQYAVV
INSGKSKDEVQDAAQRLREKGVKVMSVGVQDFDRRELEEMGSPDLVYDMQREDEVRHIVE
DMNVVIQGTGQQQHRITANKEAVGACTTAIGADLVFLIEEFSRVRQPNFQQVVNFLKTIV
SSLSIHPGTVRFGLVFYSEEPRLEFSLDTFQNPAKILEHLDKLTYRERRGRTKTGAALDF
LRNEVFIQEKGSRSNHGVQQIAVVITEGFSQDSVSRPASHLRRAGITIYAVGTQNVSESK
DLEKIASYPHWKYSVPLESFLQLSIVRSKLINQLCSEMVDSKVSFRGMSYPLQEGCVHVE
KADIYFLIDGSGSINPEDFLEMKAFMKEVIKMFQIGPNRVQFGVIQYSEKIQSQFILSQY
PSVAELKVAIDNIQQGGGGTSTGEALNNMTQVFADTGRINVAQYLIVITDGKSSDPVAKA
AERLRENGVIIYAIGVREANIDELKEIAKDKIFFVYEFDLLKDIQKEVVQDICSSEACKT
SKADIIFLIDGSESISPEDFEKMKRFVASMVNQSNIGTDGIQIGLLQFSSIPREEFRLNQ
YSSKVDIYSAIFDVQQMRDGTRTGKALNFTLPFFDSSKGGRPSVQQYLIVITDGVAQDNV
IIPAKALRDKNIIIFAIGVGEAKKSQLLEITNDENKVYHDVNFEALQNLEKEILSKVCDP
QGCNLDLSVGIDISTHSKQVQQKLQGLLPELMQQLTLLSNISCGIPNQINPRFRYLVPGS
NGKLIFDSGFEKYSYEIIQKFLVHQAAKNNNMDVNFLQSLGDNAIHLSSAKVKVLLVFTD
GLDDDLKRLKKTSEFLHSRGFSGLLIVGLEGVHKLEELQELEFGRGFAYKQPLSITLQSL
PSVLLKQLDTVVERTCCNIYAKCFGEDGYRGDYGSSGRKGEKGFDGLPGHPGEEGRYGER
GPQGLPGLRGEEGCPGMRGPKGARGFSGEKGNPGEEGVDGLDGEQGNRGIPGSSGEKGNR
GNRGLTGPPGQPGERGEPGLRGDPGDPGTNSYVQGPKGEKGRRGHQGSSNFDGPQGEPGN
VGPWGTIGRRGLPGLKGVPGESGEQGYQGELGYPGSQGSRGRQGPPGTSGQKGLVGAQGN
PGPPGPKGSKGKAGPRGVKGELGDAGERGPQGRQGPRGQPGLPGSDGYGQPGRKGTKGER
GFPGYPGVQGEDGDPGQQGEKGAKGIRGKRGNAGFPGLVGTLGYQGPPGQMGIKGPRGLV
EMTPCKIVDFTRENCPCSRGISKCPVFPTEVAFALDMSNDVSPLDFERMRNILLSLLMKM
EISDSNCPTGARVAIVSYNAKTNYLVRFSDYKEKAALLEAVRNIPLEHSSGHRNLGATMR
FMARHVFKRVRSGLLMRKVAVFFQAGWAYDAASINTATLELAAVDVIPAVITFTKRHNLP
DTLLMDGTNRFYLFIWETERQQDVEHVARCILCYDKCRPDPECPAGAPGPQEVDVDLVFL
VDSSYGVDADVYRGSLSLVDAALEDLEVAEQPSASHRGARVALVMHTTPSFWPGVGRRPV
LEGFRLTTFSNRKQMQRLVRQAAARPLQGTPALGHALEWALENVLLAAPLPRRAQVLFAI
VASETSSWDREKLWTLSLEAKCKGITLFVLALGPGVGTHELAELAELVSAPSEQHLLRLQ
GVSEPEVNYARGFTRAFLTVLKSGTNQYPPPELTEECRGLHRGDTLLQLVTPVNRLPRHQ
FGMSGLADDLEALEATGIFLEEKRKDMTTSITRQEVLENYENNKYDIEENEQETPAKQKE
TGKEINAGTTYGPCSMDPTEGECQDHTLKWYYNKKERVCQQFWYGGCGGNANQFETKEEC
EAQCVPIQ
NT seq
7047 nt
NT seq
+upstream
nt +downstream
nt
atggagacttggaagatattttgggggatcatcctccttgaaactggttttggcttcatc
aagtcacagagtattgtctgcagggaggcctctctgggagatgttgtgtttctggtggac
gccaacatcaacccccaacatgcacgcagtgtgcggaacttcttgtacattctggtaaac
agcttcaatgtcagcagcaagaccatccgtgtgggtctggcccagtatagcgatgtgccc
cattcagagttcttgctttccacctaccaccgcaaagctgatgtgttgagacacattcgg
cactttaaatttaagcctgggggcaagaagatgggcctggccctgaagtttattctagac
caccacttccaggaagcatcagggagccgggcaagccaaggggtacctcagattgccgtg
gtgatcagcagtgggccagttgaggaccatgtccatggacctgcggaggcattgaggcgg
gcaggcatcctgctttatgctattggcgtcagagatgcagtttgggcagagctcagggaa
attgccagtagtcctcaggagaattttacctcctttgttccttacttctctggtctgagc
aatctcgcccagaagctgcggcaggagctctgtgatatgttggcaaaggcagctccacgt
gttgaccacgtctctccagcttgcagagaagcagccctggcagacattgtgtttctagta
gacagttcaactagcatcggaccccaaaacttccagaaagtcaagaacttcctttactcc
gtcgtcttggggcttgacatcagcagtgaccatgtccgagtgggacttgcccagtataat
gacaacatctacccagccttccaactgaaccagcaccctctgaaaagcatggtcttggag
cagatccagaatctgccataccgcacaggaggcacaaacacagggagtgccctggagttt
atcaggaccaactatttgactgaggagtctggcagtcgggccaaggacagagttcctcag
atagttatcctggtgacagacggggagtcaaacgatgaggtacaggaggtggctgaccgg
ttgaaagaagatggagttgttgtgtatgtggtaggggtcaatgtccaggatgtccaagag
ttgcaaaaaatagccagtgaaccatttgagaagtttctcttcaacaccgaaaacttcaat
atcctgcaggatttttcaggaagtattcttcagactctgtgctcagcagtggagggtaag
ataaaagaattcatcaaagcctatgcagatgtggtctttcttgctgacgcatcacaggac
acatcacgggccagtttccagaggatgcagaatttcctctccagagtggttggcatgctg
gaggttggcagggacaagtaccaaatcgggctggctcagtatggtgatcaaggtcacact
gagtttttgctcaatacctacaagaaccagaatgagatgatagctcacattcatgagcgt
tttgtgcccctgggtggctccaggaggacaggcaaagcactgcaataccttcttcagaca
ttcttccaggagaaagcaggaagtcggtttctccagggcattccccagtatgcagtggtc
attaactcaggcaaatccaaggatgaagtccaggatgctgcacagagactaagagagaaa
ggcgtgaaagttatgtctgtgggtgtgcaggactttgacaggagagaactggaagagatg
gggtctccagaccttgtctatgatatgcagagagaagatgaagtcagacacatagtagaa
gatatgaacgtggtgatccaaggcactggacagcagcagcacaggattacagccaacaag
gaggctgtaggagcatgcacaactgctatcggggctgacttagtattcctcattgaggaa
tttagcagggttaggcaacccaatttccaacaagttgtcaatttcctgaagaccattgtc
agttctttaagcattcatcctggtactgtgagatttggcttggtcttctacagtgaggaa
ccacgactcgaattttcactggacacatttcagaatccagccaaaatcttggagcatttg
gacaaattaacctaccgggaaagaagaggaaggacaaagactggtgctgctttagatttc
ctgagaaacgaggttttcattcaggagaagggcagccggtccaaccacggtgtgcagcag
atagctgtggtcatcacggaaggcttctcccaagacagtgtatctagacccgcttctcac
ctccgaagggcaggcatcaccatctatgcagtgggcacccagaatgtctcagagagtaag
gacctggagaagatagcatcatatcctcattggaagtattcagtccccctggaatccttt
ttgcagctctccatagtacgaagcaagcttataaaccagctctgctctgagatggtggac
agtaaagtttcctttagagggatgagctatcccctacaagaaggttgtgtgcacgtcgaa
aaggcagatatttacttccttattgatgggtctggcagcatcaatccagaagattttctt
gagatgaaggcgttcatgaaagaagtgataaaaatgttccagatcggacccaacagagta
cagtttggagtcattcagtactcagaaaaaattcaaagtcaatttatcctcagccagtat
cccagtgtggcagagctgaaggtagccattgataacatccagcaggggggaggtggcacc
tcaaccggtgaggccttgaacaacatgactcaggtttttgcagacactggccgaatcaat
gttgctcaatatcttatcgtcatcactgacggtaaatcttcagacccggtggctaaggct
gcagagagattgagggaaaatggagttatcatttatgccattggagtaagagaagctaac
attgatgagcttaaggaaatagctaaagacaagatattttttgtgtatgagtttgattta
ctgaaggacatccaaaaagaagtggtacaggacatctgctcttcagaggcctgtaagact
agtaaagctgacattatcttcctgatagatggttcagaatccatctccccagaagacttt
gaaaagatgaaaagatttgtggcgagcatggtgaaccaatctaatattggtactgatgga
attcaaattggccttttgcagttcagctcaatcccccgggaagaattcaggctcaaccaa
tactcctcaaaggtggacatttacagtgccatctttgatgttcagcagatgagggatggc
acccgcactgggaaagctctgaatttcactctgcctttttttgacagttcaaaaggaggg
agacccagtgttcaacaatatttgattgtgatcaccgatggggtcgcccaagataatgta
atcataccagccaaagccctcagggacaaaaacataattatttttgccattggggtggga
gaagccaaaaaatcacaacttttggagatcactaatgacgagaacaaagtgtaccatgat
gtaaattttgaggccctgcagaacctggagaaggaaattctttctaaggtctgtgatcca
caaggatgcaacctggatttgtctgtaggaattgatatctcaacccattcaaagcaagtt
cagcagaagcttcaagggttactgccagaactgatgcaacagttgactttgctttctaac
atcagctgtggcattcctaatcagatcaacccaagattccgctacttggttcctggctca
aatggcaaacttatctttgactcaggctttgaaaaatacagttatgagatcatccagaaa
ttcttggttcatcaggctgccaagaataacaatatggatgtgaactttttgcagtccttg
ggagataatgctattcatctctcttctgctaaagtaaaggttcttttagtgtttacagat
ggactggatgatgatttaaagagactgaaaaaaacgtcggagtttctccacagcagagga
ttctctggactcctaatcgttggcctggaaggtgtccataaattagaagagctccaggag
ctggaatttggcagagggtttgcatataagcaacctctgagcatcacactgcaatccctc
ccaagcgtcttactgaagcaacttgatacagttgtggaaagaacatgctgcaatatatat
gcaaaatgttttggagaggatgggtacagaggtgattatgggagttctgggaggaaggga
gagaagggttttgatgggttacctggtcatcctggtgaagaaggcagatatggagaacga
ggcccccagggtcttcctggactccgaggtgaggaaggatgccctggtatgaggggacct
aagggagcaagaggattttcaggagagaagggcaaccctggtgaggaaggagttgatggc
ttggatggagaacagggtaatcgtggaatcccagggtcatctggagaaaaaggaaatagg
ggaaatcggggcttgacgggaccgccaggacaacctggagagcgtggagagcctggatta
aggggagatcctggggatcctggaactaatagctatgtccaaggccctaagggagaaaaa
ggaaggcgtgggcatcagggaagttctaattttgatggacctcagggagaacctggaaat
gtcggcccttgggggacaataggaaggcgaggtctgccaggattaaagggtgtacctgga
gaatccggtgaacagggttaccaaggagagcttgggtatccaggctcacagggatcaaga
ggaaggcaaggaccaccaggaacttctggacaaaaaggcttagtgggtgctcaggggaat
cctgggcctccagggccaaagggttcaaaaggaaaagctggaccaagaggagtgaaggga
gagcttggtgatgcaggagaaagaggcccacagggtcgacaaggaccaagagggcaacct
ggtcttcctggttctgatggatatggacaaccaggaagaaaaggaacaaagggtgaacgt
ggattccctggctatcctggtgtccaaggagaagatggtgacccgggccaacaaggagaa
aagggggcaaagggaataagagggaagaggggtaatgctggctttcctggattagttgga
actttaggttaccaaggcccaccaggacaaatgggtatcaagggccccagaggtttggta
gaaatgacgccttgcaaaattgttgatttcacacgtgaaaactgcccttgttcaagaggt
atttctaaatgcccagtgttcccaaccgaagtggcctttgccttggacatgtcaaatgat
gtctccccgttggattttgagaggatgagaaacattttattgtctctgttgatgaagatg
gaaataagtgacagtaactgcccaacaggtgcccgtgtggccattgtttcctacaatgcc
aaaaccaattacttggttcgtttctcagactacaaggagaaggctgcactcctggaggct
gtcaggaacatccccctggagcactcatctggccacaggaaccttggggccaccatgagg
tttatggcgagacacgtgttcaaacgtgtacgctcaggtcttctcatgaggaaggtggct
gtgttcttccaggcgggctgggcctatgatgcagcttccatcaatacagccacactggag
cttgctgcagtggacgtcatccccgcggtcatcaccttcacaaagagacacaacctccca
gacactctgctgatggatggaaccaacagattttacttgttcatctgggaaacagagcgc
cagcaggatgtggagcacgtggcccgctgcattctctgctacgacaaatgcagaccagat
ccagaatgcccggctggcgcgccggggccccaggaggtggacgtggacttggtgttcctg
gtggacagctcctatggagtggatgccgacgtgtaccgcgggtctttgagtctagtggat
gccgcgctagaagacctggaggtggctgagcagccgagcgcgtcccaccgtggggcacgc
gtggccctggtgatgcacacaacacccagcttctggccgggtgtgggtcgccgccctgtg
ctcgagggcttccgcctgactacctttagcaaccggaagcagatgcagagacttgtgcgc
caggctgcagcccgccccttacagggaacccccgctctgggccacgccctggagtgggcg
ctggagaatgtgctcctggcagcccctctgccgcggagggcacaagtcctcttcgccatc
gtggccagcgagacaagtagctgggacagggagaagctatggactctgtccctggaggcc
aaatgcaagggcatcactctctttgtgctggccttgggtccgggtgtggggacacatgag
ctagccgagctggccgagctggtcagtgccccctctgagcagcatctactgcgcctacaa
ggggtctcggagccagaggttaactacgctcggggattcactcgggccttcctgaccgtc
ctaaaaagtgggacaaaccagtacccacccccagaactcaccgaagaatgtaggggccta
caccgtggggacactctgctgcaattagtcacgcctgtcaacaggttgcccaggcaccag
tttggtatgtctggcttggctgatgatttggaagcacttgaagcaacaggcatttttcta
gaagagaagagaaaagacatgacaacatctataactcggcaagaagtgcttgaaaattat
gaaaataacaaatatgacattgaagaaaacgaacaagaaacaccagcaaaacaaaaagaa
actggaaaagaaataaatgcaggcactacctatggtccttgttccatggatccaacagaa
ggtgagtgccaggatcacaccctgaagtggtattacaacaagaaggaacgggtttgccag
cagttctggtatggcggctgtgggggtaatgccaaccagtttgaaaccaaggaagaatgt
gaggctcagtgtgtcccaatacagtaa
DBGET
integrated database retrieval system