Chlorocebus sabaeus (green monkey): 103242545
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Entry
103242545 CDS
T04361
Symbol
RPA1
Name
(RefSeq) replication protein A1
KO
K07466
replication factor A1
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03030
DNA replication
csab03420
Nucleotide excision repair
csab03430
Mismatch repair
csab03440
Homologous recombination
csab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103242545 (RPA1)
03420 Nucleotide excision repair
103242545 (RPA1)
03430 Mismatch repair
103242545 (RPA1)
03440 Homologous recombination
103242545 (RPA1)
03460 Fanconi anemia pathway
103242545 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csab03000
]
103242545 (RPA1)
03032 DNA replication proteins [BR:
csab03032
]
103242545 (RPA1)
03400 DNA repair and recombination proteins [BR:
csab03400
]
103242545 (RPA1)
Transcription factors [BR:
csab03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
103242545 (RPA1)
DNA replication proteins [BR:
csab03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
103242545 (RPA1)
DNA repair and recombination proteins [BR:
csab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
103242545 (RPA1)
MMR (mismatch excision repair)
103242545 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
103242545 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
REPA_OB_2
Rep-A_N
Rep_fac-A_C
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
103242545
NCBI-ProteinID:
XP_008008883
Ensembl:
ENSCSAG00000013833
LinkDB
All DBs
Position
16:1470375..1537603
Genome browser
AA seq
653 aa
AA seq
DB search
MWRLRSARARPWAARTSGAGAAHATPRANNCAARGTPVGQLELSWGPRGSRGDGAMVGQL
SEGAIAAIMQQGETSMKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPL
VEQERLSSNCVCQIHRFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNEGHGQP
QAAPPASAGSPAASSKPQQQHGSSGAGSTVSKAYGASKTFGKAGGPSLSNTSGGTQSKVV
PIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNEQVDKF
FSLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDRHLPTVQFDFTGI
DDLESKSKDSLVDVIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDA
DKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGV
SISDLKSGGVGGANTNWKTLYEVKSENLGQGDKVPGIPNHLHRGLQSVQEDRLRNLTSDT
SCQRCNSYPGAVTRVNIADFQENQWVTCFQESAEAILGQNAAYLGELKDKNEQAFEEVFQ
NANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVLSIRRSASM
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggctgcgcagcgcccgggcccgcccctgggccgcgcgcacgtcgggggcggga
gcggcgcacgcaactcctcgggccaataactgcgcagcgcgcgggaccccggtggggcag
ctcgagctgtcgtggggtccgcgcgggagtcggggcgacggagccatggtcggccaactg
agcgagggggccattgcggctatcatgcagcagggggagacatccatgaagcccatcctc
caggtcattaacatccgtcccattaccacggggaacagtccgccgcgttatcgactgctt
atgagtgatggactgaacactctgtcctctttcatgttggcgacacagttgaaccccctg
gtggagcaagaacgactgtccagcaactgtgtttgccagattcacagattcatcgtgaac
actctgaaagacggaaggagagtcgttattttgatggaattagaagttttgaagtcagct
gaagcagttggagtaaagattggcaatccagtgccctataatgaaggacatgggcagcca
caagcagcacctccagcgtcagcaggcagcccagcggcaagcagcaagccccagcaacag
catggaagctcgggagcgggttccactgtttctaaggcttatggtgcttcaaagacattt
ggaaaagctggaggtcccagcctgtcaaacacttctgggggaacacagtccaaagtggtg
cccattgccagcctcactccttaccagtccaagtggactatttgtgctcgtgttaccaac
aaaagtcagatccgtacctggagcaactcccgcggggaagggaagcttttctctctcgaa
ctggttgatgaaagtggtgaaatcagagctacagctttcaacgagcaagtggacaagttc
ttttcccttattgaagtgaacaaggtgtattacttctcgaaaggcactctgaagattgct
aacaaacagttcacagctgttaaaaatgactacgagatgaccttcaataacgagacttcc
gtcatgccctgtgaagacgaccgtcatttacccacggttcagtttgatttcacggggatc
gatgacctcgagagcaagtcgaaagactcactcgtagacgtcatcgggatctgcaagagc
tacgaagatgccactaaaatcacagtgaggtctaataacagagaggttgccaagaggaat
atctacctgatggacacatctgggaaggtggtgactgccacgctgtggggggaagatgct
gataaatttgatggttccagacagcccgtgttggctatcaaaggagccagagtctctgat
ttcggtggacggagcctctccgtgctgtcttcaagcactatcattgcgaatcctgacatc
ccagaggcctataagcttcgtggttggtttgacgcagaaggacaagccttagacggtgtt
tccatctctgatctaaagagcggcggagttggaggggccaacaccaactggaaaaccttg
tacgaggtcaaatccgagaacctgggccaaggcgacaaggtacccggcattcctaaccac
cttcacagaggcctgcaaagtgtgcaggaggatagacttcggaacttgacttccgacacc
agctgtcagcgctgtaattcttacccgggggctgtgacccgagtaaatattgcagatttt
caagagaatcagtgggtgacttgtttccaggagtctgctgaagcgatccttggacaaaat
gctgcttatcttggggaattaaaagacaagaatgaacaggcatttgaagaagttttccag
aatgccaacttccgatctttcatattcagagtcagggtcaaagtagagacctacaacgac
gagtctcgaattaaggccactgtgatggacgtgaagccagtggactacagagagtacggc
cgaaggctggtcctgagcatcaggagaagcgcgtcgatgtga
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integrated database retrieval system