KEGG   Chlorocebus sabaeus (green monkey): 103242545
Entry
103242545         CDS       T04361                                 
Symbol
RPA1
Name
(RefSeq) replication protein A1
  KO
K07466  replication factor A1
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab03030  DNA replication
csab03420  Nucleotide excision repair
csab03430  Mismatch repair
csab03440  Homologous recombination
csab03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103242545 (RPA1)
   03420 Nucleotide excision repair
    103242545 (RPA1)
   03430 Mismatch repair
    103242545 (RPA1)
   03440 Homologous recombination
    103242545 (RPA1)
   03460 Fanconi anemia pathway
    103242545 (RPA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:csab03000]
    103242545 (RPA1)
   03032 DNA replication proteins [BR:csab03032]
    103242545 (RPA1)
   03400 DNA repair and recombination proteins [BR:csab03400]
    103242545 (RPA1)
Transcription factors [BR:csab03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    103242545 (RPA1)
DNA replication proteins [BR:csab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    103242545 (RPA1)
DNA repair and recombination proteins [BR:csab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     103242545 (RPA1)
   MMR (mismatch excision repair)
     103242545 (RPA1)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     103242545 (RPA1)
SSDB
Motif
Pfam: REPA_OB_2 Rep-A_N Rep_fac-A_C tRNA_anti-codon DUF223
Other DBs
NCBI-GeneID: 103242545
NCBI-ProteinID: XP_008008883
Ensembl: ENSCSAG00000013833
LinkDB
Position
16:1470375..1537603
AA seq 653 aa
MWRLRSARARPWAARTSGAGAAHATPRANNCAARGTPVGQLELSWGPRGSRGDGAMVGQL
SEGAIAAIMQQGETSMKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLATQLNPL
VEQERLSSNCVCQIHRFIVNTLKDGRRVVILMELEVLKSAEAVGVKIGNPVPYNEGHGQP
QAAPPASAGSPAASSKPQQQHGSSGAGSTVSKAYGASKTFGKAGGPSLSNTSGGTQSKVV
PIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNEQVDKF
FSLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEDDRHLPTVQFDFTGI
DDLESKSKDSLVDVIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDA
DKFDGSRQPVLAIKGARVSDFGGRSLSVLSSSTIIANPDIPEAYKLRGWFDAEGQALDGV
SISDLKSGGVGGANTNWKTLYEVKSENLGQGDKVPGIPNHLHRGLQSVQEDRLRNLTSDT
SCQRCNSYPGAVTRVNIADFQENQWVTCFQESAEAILGQNAAYLGELKDKNEQAFEEVFQ
NANFRSFIFRVRVKVETYNDESRIKATVMDVKPVDYREYGRRLVLSIRRSASM
NT seq 1962 nt   +upstreamnt  +downstreamnt
atgtggcggctgcgcagcgcccgggcccgcccctgggccgcgcgcacgtcgggggcggga
gcggcgcacgcaactcctcgggccaataactgcgcagcgcgcgggaccccggtggggcag
ctcgagctgtcgtggggtccgcgcgggagtcggggcgacggagccatggtcggccaactg
agcgagggggccattgcggctatcatgcagcagggggagacatccatgaagcccatcctc
caggtcattaacatccgtcccattaccacggggaacagtccgccgcgttatcgactgctt
atgagtgatggactgaacactctgtcctctttcatgttggcgacacagttgaaccccctg
gtggagcaagaacgactgtccagcaactgtgtttgccagattcacagattcatcgtgaac
actctgaaagacggaaggagagtcgttattttgatggaattagaagttttgaagtcagct
gaagcagttggagtaaagattggcaatccagtgccctataatgaaggacatgggcagcca
caagcagcacctccagcgtcagcaggcagcccagcggcaagcagcaagccccagcaacag
catggaagctcgggagcgggttccactgtttctaaggcttatggtgcttcaaagacattt
ggaaaagctggaggtcccagcctgtcaaacacttctgggggaacacagtccaaagtggtg
cccattgccagcctcactccttaccagtccaagtggactatttgtgctcgtgttaccaac
aaaagtcagatccgtacctggagcaactcccgcggggaagggaagcttttctctctcgaa
ctggttgatgaaagtggtgaaatcagagctacagctttcaacgagcaagtggacaagttc
ttttcccttattgaagtgaacaaggtgtattacttctcgaaaggcactctgaagattgct
aacaaacagttcacagctgttaaaaatgactacgagatgaccttcaataacgagacttcc
gtcatgccctgtgaagacgaccgtcatttacccacggttcagtttgatttcacggggatc
gatgacctcgagagcaagtcgaaagactcactcgtagacgtcatcgggatctgcaagagc
tacgaagatgccactaaaatcacagtgaggtctaataacagagaggttgccaagaggaat
atctacctgatggacacatctgggaaggtggtgactgccacgctgtggggggaagatgct
gataaatttgatggttccagacagcccgtgttggctatcaaaggagccagagtctctgat
ttcggtggacggagcctctccgtgctgtcttcaagcactatcattgcgaatcctgacatc
ccagaggcctataagcttcgtggttggtttgacgcagaaggacaagccttagacggtgtt
tccatctctgatctaaagagcggcggagttggaggggccaacaccaactggaaaaccttg
tacgaggtcaaatccgagaacctgggccaaggcgacaaggtacccggcattcctaaccac
cttcacagaggcctgcaaagtgtgcaggaggatagacttcggaacttgacttccgacacc
agctgtcagcgctgtaattcttacccgggggctgtgacccgagtaaatattgcagatttt
caagagaatcagtgggtgacttgtttccaggagtctgctgaagcgatccttggacaaaat
gctgcttatcttggggaattaaaagacaagaatgaacaggcatttgaagaagttttccag
aatgccaacttccgatctttcatattcagagtcagggtcaaagtagagacctacaacgac
gagtctcgaattaaggccactgtgatggacgtgaagccagtggactacagagagtacggc
cgaaggctggtcctgagcatcaggagaagcgcgtcgatgtga

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