Chlorocebus sabaeus (green monkey): 103242548
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Entry
103242548 CDS
T04361
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab04080
Neuroactive ligand-receptor interaction
csab04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103242548 (TRPV1)
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
103242548 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csab04040
]
103242548 (TRPV1)
Ion channels [BR:
csab04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103242548 (TRPV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_5
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
103242548
NCBI-ProteinID:
XP_008008886
Ensembl:
ENSCSAG00000013654
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Position
16:complement(3071158..3091068)
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AA seq
759 aa
AA seq
DB search
MKKWSSTDSGAAVDPLQQDTCPDPPDGDPNSRPPPAKPQLSMAKSRTRLFGKGDSEEAFL
VDCPHEEGELASCPTITVSPVITIQRPGDGPTSARLPFQDSVAASTERTLRLYDRRSIFE
AVAQNNCQDLESLLLFLQNSKKHLTDNEFKDPETGKTCLLKAMLNLHDGQNDTIPLLLEI
ARQTGSLKEFVNASYTDSYYKGQTALHIAIERRNMALVTLLVENGADVQAAANGDFFKKT
KGRPGFYFGELPLSLAACTNQLGIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTA
DNTKFVTSMYNEILILGAKLHPTLKLEELTNKKGMTPLALAAGTGKIGVGGSFGSSWCSA
GTGCYPIGLTHAVLRFPTFGRPIVVPFRKHLNAHRLATSSIAWDLTLSVYLQIQYFLQRR
PSMKTLFVDSYSEMLFFLQSLFMLATVVLYFSHLKEYVASMVFSLALGWTNMLYYTRGFQ
QMGIYAVMIEKMILRDLCRFMFVYVVFLFGFSTAVVTLIEDGKNNSLPSESTSHRWRGPG
CRPPDSSYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVFIILLLAYVILTYILLLNMLI
ALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRKAFRSGKLLQVGYTPDGKDDYR
WCFRVDEVNWTTWNTNVGIINEDPGNCEGVKRTLSFSLRSSRVSARHWKNFALVPLLREA
STRDRPSAQPEEVHLRQFSGSLKPEDAEVFKSPPTSGEK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatggagcagcacagactcgggggcggctgtggacccgctccaacaggacacc
tgcccagaccccccggatggagaccctaactccaggccacctccagccaagccccagctc
tccatggccaagagccgcacccggctgtttgggaagggtgactcggaggaggctttcctg
gtggattgtcctcacgaggaaggtgagctggcctcctgcccgaccatcacagtcagccct
gttatcaccatccagaggccgggagacggtcccaccagtgccaggctgccgttccaggac
tctgttgctgccagcaccgagaggaccctcaggctctatgaccgcaggagtatctttgaa
gcggttgctcagaataactgccaggatctggagagcctgctgctcttcctgcagaacagc
aagaagcacctcacggacaacgagttcaaagaccctgagacagggaagacttgtctgctg
aaagccatgctcaacctgcatgacgggcagaacgacaccatccccctgctcctggagatc
gcacggcagaccggcagcctaaaggagtttgtcaatgccagctacacggacagctactac
aagggccagacagcgctgcacatcgccattgagaggcgcaacatggccctggtgaccctc
ctggtggagaacggagcagacgtccaggctgcggccaatggggacttctttaagaaaacc
aaagggcgtcctggattctacttcggtgaactgcccctgtccctggccgcgtgcaccaac
cagctgggcatcgtgaagttcctgctgcagaactcctggcagccggccgacatcagcgcc
agggactcggtgggcaacacggtgctgcacgccctggtggaggtggccgacaacacggcc
gacaacaccaagtttgtgacgagcatgtacaatgagattctgatcctgggggccaaactg
caccccacgctgaagctggaggagctcaccaacaagaagggaatgacgccgctggccctg
gccgctgggaccgggaagatcggggtaggagggagcttcggctcaagctggtgcagtgcg
gggacagggtgttaccccattggcctgacccacgccgttctgcgctttcccactttcggc
cgccccatcgtggtgccattcaggaagcatctgaacgctcaccgtttagccacatcgagc
attgcctgggatcttactctctctgtttacctgcagattcagtatttcctgcagaggcgg
ccgtcgatgaagaccctgtttgtggacagctacagtgagatgcttttctttctgcagtca
ctgttcatgctggccaccgtggtgctgtacttcagccacctcaaggagtacgtggcctcc
atggtgttctccctggccttgggctggaccaacatgctctactacacccgtggcttccag
cagatgggcatctacgctgtcatgatagagaagatgatcctgagggacctgtgtcgcttc
atgttcgtctatgtcgtcttcttgttcgggttttccacagcggtggtgacgctgattgaa
gacgggaagaacaactcgctgccgtctgagtccacctcgcacaggtggcgggggcctggc
tgcaggccccccgatagctcctacaacagcctgtactccacctgcctggagctcttcaag
ttcaccatcggcatgggggacctggagttcaccgagaactacgacttcaaggctgtcttc
atcatcctgctgctggcttatgtgattctcacctacatcctcctgctcaacatgctcatc
gccctcatgggcgagacggtcaacaagatcgcacaggagagcaagaacatctggaagctg
cagagagccatcaccatcctggacacggagaagagcttcctcaagtgcatgaggaaggcc
ttccgctcaggcaagctgctgcaggtgggatacacacctgacggcaaggacgactacagg
tggtgcttcagggtggacgaggtgaactggaccacctggaacaccaacgtgggcatcatc
aacgaagacccgggcaactgtgagggcgtcaagcgcaccttgagcttctccctgcggtca
agcagagtttcagccagacactggaagaactttgccctggtcccccttttaagagaggca
agcactcgagataggccctctgctcagcccgaggaagtgcacctgcgacagttttcaggg
tccctgaagccagaagacgctgaggtcttcaagagtcctcccacttccggagagaagtga
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