Entry |
|
Symbol |
ALYREF
|
Name |
(RefSeq) Aly/REF export factor
|
KO |
|
Organism |
csab Chlorocebus sabaeus (green monkey)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:csab00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103243737 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
103243737 (ALYREF)
03015 mRNA surveillance pathway
103243737 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
103243737 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103243737 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:csab03019]
103243737 (ALYREF)
03041 Spliceosome [BR:csab03041]
103243737 (ALYREF)
Messenger RNA biogenesis [BR:csab03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103243737 (ALYREF)
TREX complex
103243737 (ALYREF)
Spliceosome [BR:csab03041]
Complex C
Other components
EJC/TREX
103243737 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103243737 (ALYREF)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
16:complement(73761763..73765560)
|
AA seq |
264 aa
MPDSAPAMADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVSRGGG
PIRNRPAIARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNL
DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG
RPMNIQLVTSQIDTQRRPAQSVNRGGMTRNRGAGGFGGGGGTRRGTRGGARGRGRGAGRN
SKQQLSAEELDAQLDAYNARMDTS |
NT seq |
795 nt +upstreamnt +downstreamnt
atgcccgattccgcgcccgccatggccgacaaaatggacatgtctctggacgacatcatt
aaactgaaccggagccaacgaggcggtcgcggcgggggccggggccgcggccgggccggc
tcccagggcggtcgcggcggtggggcgcaggccgccgcgcgagtgagtcgaggcggcggg
cccatccggaaccggcctgccatcgcccgcggcgcggccggcggaggcggcaggaaccga
ccggcgccctacagcaggccaaaacaacttcccgacaagtggcagcacgatcttttcgac
agtggcttcgggggtggtgccggcgtggagacgggtgggaaactgctggtgtccaatctg
gattttggagtttcagacgccgatattcaggaactctttgctgaattcgggacgctgaag
aaggcggctgtgcactatgatcgctctggccgcagcttaggaacagcagacgtgcacttt
gagcggaaggcagatgccctgaaggccatgaagcagtacaacggtgtcccgctggatggc
cgccccatgaatattcagcttgtcacatcacagattgatacacagcggagacctgcacag
agcgtaaacagaggtggcatgactagaaaccgtggcgctggaggttttggtggcggtgga
ggcactcggaggggcacccgtggaggcgcccgtggaagaggcagaggtgccggcagaaat
tcaaagcagcagctttcggcagaggagctggatgcccagctggacgcctataatgcgaga
atggacaccagttaa |