KEGG   Chlorocebus sabaeus (green monkey): 103243737
Entry
103243737         CDS       T04361                                 
Symbol
ALYREF
Name
(RefSeq) Aly/REF export factor
  KO
K12881  THO complex subunit 4
Organism
csab  Chlorocebus sabaeus (green monkey)
Pathway
csab03013  Nucleocytoplasmic transport
csab03015  mRNA surveillance pathway
csab03040  Spliceosome
csab05014  Amyotrophic lateral sclerosis
csab05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:csab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103243737 (ALYREF)
  09122 Translation
   03013 Nucleocytoplasmic transport
    103243737 (ALYREF)
   03015 mRNA surveillance pathway
    103243737 (ALYREF)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    103243737 (ALYREF)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    103243737 (ALYREF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csab03019]
    103243737 (ALYREF)
   03041 Spliceosome [BR:csab03041]
    103243737 (ALYREF)
Messenger RNA biogenesis [BR:csab03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     103243737 (ALYREF)
    TREX complex
     103243737 (ALYREF)
Spliceosome [BR:csab03041]
 Complex C
  Other components
   EJC/TREX
    103243737 (ALYREF)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103243737 (ALYREF)
SSDB
Motif
Pfam: RRM_1 FoP_duplication FYTT
Other DBs
NCBI-GeneID: 103243737
NCBI-ProteinID: XP_008011476
Ensembl: ENSCSAG00000002216
UniProt: A0A0D9S4M9
LinkDB
Position
16:complement(73761763..73765560)
AA seq 264 aa
MPDSAPAMADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVSRGGG
PIRNRPAIARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNL
DFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDG
RPMNIQLVTSQIDTQRRPAQSVNRGGMTRNRGAGGFGGGGGTRRGTRGGARGRGRGAGRN
SKQQLSAEELDAQLDAYNARMDTS
NT seq 795 nt   +upstreamnt  +downstreamnt
atgcccgattccgcgcccgccatggccgacaaaatggacatgtctctggacgacatcatt
aaactgaaccggagccaacgaggcggtcgcggcgggggccggggccgcggccgggccggc
tcccagggcggtcgcggcggtggggcgcaggccgccgcgcgagtgagtcgaggcggcggg
cccatccggaaccggcctgccatcgcccgcggcgcggccggcggaggcggcaggaaccga
ccggcgccctacagcaggccaaaacaacttcccgacaagtggcagcacgatcttttcgac
agtggcttcgggggtggtgccggcgtggagacgggtgggaaactgctggtgtccaatctg
gattttggagtttcagacgccgatattcaggaactctttgctgaattcgggacgctgaag
aaggcggctgtgcactatgatcgctctggccgcagcttaggaacagcagacgtgcacttt
gagcggaaggcagatgccctgaaggccatgaagcagtacaacggtgtcccgctggatggc
cgccccatgaatattcagcttgtcacatcacagattgatacacagcggagacctgcacag
agcgtaaacagaggtggcatgactagaaaccgtggcgctggaggttttggtggcggtgga
ggcactcggaggggcacccgtggaggcgcccgtggaagaggcagaggtgccggcagaaat
tcaaagcagcagctttcggcagaggagctggatgcccagctggacgcctataatgcgaga
atggacaccagttaa

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