Entry |
|
Symbol |
DDX43
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Name |
(RefSeq) DEAD-box helicase 43
|
KO |
|
Organism |
csab Chlorocebus sabaeus (green monkey)
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Brite |
KEGG Orthology (KO) [BR:csab00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:csab03041]
103243899 (DDX43)
Enzymes [BR:csab01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103243899 (DDX43)
Spliceosome [BR:csab03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103243899 (DDX43)
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
17:complement(1726285..1752561)
|
AA seq |
653 aa
MSHHGGTPKASTWVVASRRSSTVSRAPERRPVEELNRRGPEGYSVGRGSRWRGPCRPPEA
VAAGHEEPPLCFALKNHFVGAVIGRGGSKIKNIQSTTNTTIQIIQEQPESLVKIFGSKAM
QAKAKAVIDNFVKKLEENYNSECGVDTAFQPSVGKDRSTDNNVVAGDRPLIDWDQIREEG
LKWQKTKWADLPPIKKNFYKESTATSAMSKVQADSWRKENFNITWDDLKDGEKRTIPNPT
CTFDDAFQCYPEVIENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPG
FIHLDLQPTLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKGLRSVCVYGGGNRDEQIE
ELRKGVDIIIATPGRLNDLQMNNFVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPD
RQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMHTF
LQNMSSTDKVIVFVSRKAVADHLSSDLILGNISIESLHGDREQRDREKALENFKTGKVRI
LIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGVFQRSFCQWLRGLRHINR
KGKWKEKWKDLKEGPRSFINVFWTSVVENSRFFRNIIRRKYWTCWQYEETGLI |
NT seq |
1962 nt +upstreamnt +downstreamnt
atgtcccaccacggaggaactcccaaggcctctacatgggtcgttgctagtcggcgaagc
tcgacagtgtcccgagcaccagagaggaggccggtggaggagttgaatcgaagaggtcct
gagggatatagtgtcggcagaggtagccgctggagaggcccctgtaggcccccggaggcc
gtggccgctggtcacgaggaaccgccgctttgttttgctttgaagaaccactttgtcggc
gcggtgatcggtcgtggtgggtcaaaaataaagaatatacaaagtacaacaaacaccaca
atccaaataatacaagaacaaccagaatcattagtcaaaatttttggcagcaaggcaatg
caagcaaaagcaaaagcagtgatagataattttgttaaaaagctagaagaaaattacaat
tcagaatgtggagttgatactgcattccaaccttctgttggaaaagatcgaagcacagat
aacaatgttgttgcaggagatcggccattgatagattgggatcaaattagagaggaaggt
ttgaaatggcaaaaaacaaagtgggcagatttaccaccaattaagaaaaacttttacaaa
gagtccactgccacaagtgccatgtcaaaagtacaagcagatagttggaggaaagaaaat
tttaatataacgtgggatgacttgaaggatggggagaaacgaactatccccaatcctacc
tgcacatttgatgacgcctttcaatgttatcctgaggttatagaaaacattaaaaaggca
ggttttcaaaagccaacacctattcagtcacaggcatggcccattgtgttgcaaggaata
gatcttataggagtagcccagactggaacaggaaagacattgtgttatttaatgcctgga
tttattcatctggaccttcagcccacccttaaaggtcaaaggaatagacccggcatgtta
gttctaactcccactcgggaattagcacttcaagtagaaggagaatgttgcaaatattcg
tataaaggacttcggagtgtttgtgtatatggtggtggaaatagagatgaacaaatagaa
gagcttagaaaaggtgtagatatcataattgcaactcccggaagattgaatgatctgcaa
atgaataactttgtcaatctgaagaatataacctacttggttttagatgaagcagacaag
atgttggacatgggatttgaaccccagataatgaagattttgttagatgtgcgtccagat
aggcagacggttatgaccagtgctacatggcctcattcagttcatcgcctcgcacaatct
tatttgaaagaaccaatgattgtctatgttggtacattggatctagttgctgtaagttca
gtgaagcaaaatataattgtaaccaccgaggaagagaaatggagtcacatgcatactttt
ctacagaatatgtcatccacagacaaagtcattgtcttcgtttctcgaaaagctgttgcg
gatcacttatcaagtgacctaatacttggaaatatatcaatagagtctctgcatggagat
agagaacagagagatcgggagaaagcattagagaactttaaaacaggcaaagtgagaata
ctaattgcaactgatctagcctctagaggacttgatgtccatgacgttacacatgtctat
aattttgactttccacggaacattgaagaatatgtacaccgaatagggcgcacaggaaga
gcaggagtattccagaggagcttctgtcaatggctgagaggtttaaggcacatcaacaga
aaagggaaatggaaagaaaaatggaaagacctcaaggaaggcccaagaagtttcattaat
gtcttctggactagtgtggtagagaattcaagattttttagaaatataataagacggaag
tattggacatgctggcagtatgaagagaccggactgatttga |