Chlorocebus sabaeus (green monkey): 103244163
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Entry
103244163 CDS
T04361
Symbol
VPS4B
Name
(RefSeq) vacuolar protein sorting 4 homolog B
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03250
Viral life cycle - HIV-1
csab03272
Virion - Hepatitis viruses
csab04144
Endocytosis
csab04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103244163 (VPS4B)
03272 Virion - Hepatitis viruses
103244163 (VPS4B)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103244163 (VPS4B)
09143 Cell growth and death
04217 Necroptosis
103244163 (VPS4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csab04131
]
103244163 (VPS4B)
03400 DNA repair and recombination proteins [BR:
csab03400
]
103244163 (VPS4B)
Membrane trafficking [BR:
csab04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
103244163 (VPS4B)
DNA repair and recombination proteins [BR:
csab03400
]
Eukaryotic type
Check point factors
Other check point factors
103244163 (VPS4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
AAA_16
TIP49
AAA_14
RuvB_N
AAA_5
AAA_22
IstB_IS21
AAA_25
DUF815
AAA_18
AAA_2
AAA_17
nSTAND3
RNA_helicase
AAA_24
NPHP3_N
AAA_33
PhoH
AAA_7
Mg_chelatase
AAA_28
ResIII
Csx12
Parvo_NS1
NACHT
TPR_1
KAP_NTPase
bpMoxR
ABC_tran
DUF5113
MCM
TPR_11
Motif
Other DBs
NCBI-GeneID:
103244163
NCBI-ProteinID:
XP_008012055
Ensembl:
ENSCSAG00000018195
UniProt:
A0A0D9S021
LinkDB
All DBs
Position
18:16336959..16370208
Genome browser
AA seq
444 aa
AA seq
DB search
MSSTSPNLQKAIDLASKASQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRA
KCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQL
QGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGK
SYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLC
GSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPL
PEPHARAAMFKLHLGTTQNSLTEADFRELGKKTDGYSGADISIIVRDALMQPVRKVQSAT
HFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMSDMLRSLSN
TKPTVNEHDLLKLKKFTEDFGQEG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccacttcgcccaacctccagaaagcgatagatctggctagcaaagcatcgcaa
gaagacaaggctgggaactacgaagaagcccttcagctctatcagcatgctgtgcagtat
tttcttcatgtcgtgaaatatgaagcgcagggtgataaagccaagcaaagtatcagggca
aagtgtacagaatatcttgatagagcagaaaaactaaaggagtacctgaaaaataaagag
aaaaaagcacagaagccagtgaaagaaggacagccgagtccagcagatgagaaggggaat
gacagtgatggggaaggagaatctgatgatcctgaaaaaaagaaactacagaatcaactt
caaggtgccattgttatagaacgaccaaatgtgaaatggagtgacgttgctggactggaa
ggagccaaagaagcactgaaagaggctgtgatactgcctattaaatttcctcatcttttt
acaggcaagagaacaccttggaggggaatcctattatttgggccgcctggaacaggaaag
tcctacttagcaaaagctgtagcaacagaagccaacaactcaacatttttttcaatatct
tcctctgatcttgtttctaagtggctaggtgaaagtgaaaaactggttaagaatttattc
caacttgccagagagaacaagccctccattatcttcattgatgaaattgattctctgtgt
ggttcaagaagtgaaaacgaaagtgaagccgcacgtagaattaagacggagttcctagtg
caaatgcaaggggttggtgtagacaatgatggaattttggttctgggagctacaaatata
ccctgggttctggattctgccattaggcgaagatttgagaaacgaatttatatccctttg
ccggaaccccatgcccgagcagcaatgtttaaactgcacctggggaccactcagaacagt
ctcacggaagcagactttcgggaacttgggaagaaaacagatggttattcaggggcagat
ataagtatcattgtacgtgatgcacttatgcagcctgttaggaaagtacagtcagctact
cattttaaaaaggttcgcggaccttcccgagctgatcctaaccatcttgtagatgatctg
ctaacaccttgctctccaggtgaccctggtgccattgaaatgacgtggatggatgtccct
ggagataaacttttggagccagttgtttccatgtcggatatgttgcggtcactatctaac
acaaaacctacagtcaatgaacatgacttgttgaaattaaagaagtttacagaagatttt
ggtcaagaaggctaa
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