Chlorocebus sabaeus (green monkey): 103245176
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Entry
103245176 CDS
T04361
Name
(RefSeq) uncharacterized LOC103245176
KO
K16494
protocadherin beta
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csab04515
]
103245176
Cell adhesion molecules [BR:
csab04515
]
Cadherins
Protocadherins
103245176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
PLAC8
Ly49
Motif
Other DBs
NCBI-GeneID:
103245176
NCBI-ProteinID:
XP_008013801
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All DBs
Position
23:43680654..43734646
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AA seq
1641 aa
AA seq
DB search
MAGARRKSLQSRQVGSLLIFLCVSVGGATTIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGARLVSEGNKMHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEIILVEPLQSFRAE
VRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHL
HTRFRSHGPKYAELVLNKPLDREEQPEVNLTITAVDGGSPPKSGTAHIRVVVLDVNDHVP
QFSRPVYPAQVSENSPNGSLVATVTAMDLDEGTNKAITYSLAQNPEAILKTFQIDSQTGE
VRLRGPLDFEDIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVFSVFSPLPEDS
PPQTVVALFTIRDRDIQVGGKITCFFREDLPFVIKPTFGNSYSLVTDRSLDREEVSGYNI
TLVAMDTGPPSLSAETMIEVLISDVNDNPPIFREDSYILTVRENNSPAVFIGQVHAEDLD
LGENAQITYSLLPPKNGDLSVFAYISINSDNGKLYALRTMDYEAIQDFQFVVKATDGGFL
SLNSQATVRVVVLDDNDNRPMILYPQQNGTLPCNDLVPRSAEAGYLVTKVVAVDGDSGQN
SWLSYHLLKATDLGLFCVQRQNGEIRTLRQISERDPMMQKLIILVQDHGQPALSTTVSLN
ILLVDGFSEPYLQFQDPTKHSRKVNPSTKYLVISLAILSFLFLLSVTVIFIIHVYQKIKY
REKFTIQEHFYDDCNFSNNLVQGQGNGSLSQPCPYEMCSATGTGNSEFHSLKCFMPNFPF
PHATGEIKMEAGSSLPLNSERNKSRRSEGHDQVSDDYILQVPKKIPVLPDNLRIYQFTEC
EKAMEAGEGKERVPKQRQVLIFFVLLGIAQASSQPRHYSVAEETESGSFVANLLKDLGLE
IGELAVRGARVVSKGKKTHLQFDKQTGDLLLNEKLDREELCGPTEPCVLPFQVLLENPLQ
FFQAELRIRDINDHSPVFLDKEILLKISESITPGTTFLIERAQDLDVGTNSLQNYTISPN
FHFHLNLQDSLDGIMLPQLVLNRALDREEQPEIRLTLTALDGGTPPRSGTALVRIEVMDI
NDNVPEFAKLLYEVQIPEDSPIGSQVAIVSARDLDIGTNGEISYAFSQASEDIRKTFRLS
AKSGELLLRQKLDFESIQTYTVNIQATDGGGLSGTCVVFVQVMDLNDNPPELTMSTLINQ
IPENLQDTLIAVFSVSDPDSGDNGRTVCSIQDDLPFFLKPSVENFYTLVISTALDRETRS
EYNITITVTDLGTPRLKIEHNITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSA
TDRDSGTNAQVTYSLLPPRDPHLPLASLVSINADNGHLFALQSLDYEALQEFEFRVGATD
RGSPELSSEALVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEPGYLVTKVVAVDGD
SGQNAWLSYQLLKATEPGLFGVWAHNGEVRTSRLLSERDTAKHRLVVLVKDNGEPPRSAT
ATLHLLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLLSVLLFVAVWLCR
RSRAASVGRCSVPEGPFPGHLVDVSGTETLSQSYQYEVCLTGGSGTNEFKFLKPIIPNFV
AQGAERVIEANPSFRKSFEFS
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgcgcgcagaaaatctttgcaaagcaggcaagtgggatctcttcttattttt
ctgtgcgtatctgtggggggtgcgacaacgatccgctattcagtggcggaggaaatggag
agcggttcgtttgtggccaacgtagctaaggacctaggactggaggtagggaagctggct
gcgcgcggggcgcggctggtttccgagggcaacaaaatgcacttccggctccaccgcaag
acaggagatttgtttgtgaaggagaaactggatcgggagtcactttgtggcaaagccgac
ccgtgtgttctgcactttgaaataatcctggtggagccgctgcagtccttccgtgccgag
gtcagggtatttgatatcaatgacaatgccccggttttcctaaacaaggagccgctttta
aagattccggagagcacccccttgggttcacgttttcctctgcagagcgcccaggatctg
gacgtgggcctcaacggtctccaaaactacacccttagtgccaacggctatttccacctg
cacacccgcttccgcagccacgggcctaaatatgctgagctggtgctgaacaaacccctg
gaccgagaggagcagcctgaagtcaacttgacaattacggcggtggacggcgggtcaccg
cccaagtctggcacagctcacatccgcgtggtggttctggatgtcaacgaccacgtgccc
cagttctcgcgaccggtgtacccagcccaggtatcagagaacagccccaatggctctttg
gtggccacggtgactgctatggacctagacgagggcacgaacaaagcgataacttactct
ttagctcaaaacccagaagcaattctcaagacgtttcagattgactctcaaactggagag
gttcgactaagaggacccctagattttgaagacattgaaacatacgacattgacattcaa
gctacagatggtggaggcctctctgcccacagcaaagtcctagtagaagtggtggatgtg
aatgacaatcctcccgaagtgatggtcttctctgtgttcagcccactccctgaagactca
ccaccacagacggtagtagcccttttcactatcagagaccgggacattcaagtgggagga
aaaatcacctgcttcttcagagaagaccttccctttgtaatcaaacctacattcgggaat
tcttactcactggtcactgacagaagcttggatcgggaggaggtctcaggctataatatc
acccttgttgccatggatactggaccacctagcttatctgctgagactatgatagaggtg
ctaatatctgatgttaatgacaatcctccaatatttcgggaagattcctatatcttgact
gttcgagaaaataatagtcctgcagtttttattggccaagtccatgctgaggatcttgat
ttgggtgagaatgcccaaataacttattctctgttgcctccaaaaaatggagatctatca
gtctttgcttacatatccataaattcagacaatggaaagctctacgcactgagaaccatg
gattatgaggccattcaagattttcagtttgtggtaaaggcaactgatgggggcttcctg
tcactgaatagccaagctactgtcagagtggttgtcctagatgacaatgacaatcgtcca
atgatcttgtacccacagcagaatggcaccttgccctgcaatgacctggtgcccaggtct
gcagaggcaggctacctggtaaccaaagtggtggctgtggatggtgactcaggtcagaat
tcttggctttcatatcatctacttaaggccactgaccttgggttattttgtgttcaaaga
caaaatggagaaatccgtacattacggcagatatctgagagagaccccatgatgcagaaa
ttgatcattcttgttcaggatcacggccaaccagctctttcaactactgtctcactcaac
atcctgctggtagatggcttttcagagccctacctgcagttccaggatccaaccaagcat
tccagaaaggtaaatccatccactaaatatttggtaatttctctggctatcctctccttt
ctctttctcctctctgtcacagtgatcttcattatacatgtctaccaaaagattaaatat
agagaaaagtttacaattcaagagcatttctatgatgactgtaatttctctaacaatcta
gtacaaggacaaggcaatggatccttatcccaaccttgtccatatgaaatgtgttcagcc
actggcactggtaatagtgagtttcactctcttaagtgctttatgcccaacttccctttc
cctcatgccactggggagataaaaatggaggctggctccagtttgcctctaaattctgaa
aggaataagtctcggagatcagagggccatgatcaggtatctgatgactatatacttcaa
gttcccaagaaaattccagtcctacctgataacttaagaatatatcaattcactgaatgt
gaaaaggcaatggaggccggagaggggaaggagcgcgttccgaaacaaaggcaagtcctg
atattctttgttttgctgggcatagctcaggctagttcccagcctaggcactactcagtg
gccgaggaaacggagagtggctcctttgtggccaatttgttaaaagacctggggctggag
ataggagaacttgctgtgaggggggccagggtcgtttccaaaggaaaaaaaacgcatttg
cagttcgataagcagaccggggatttgttgttaaatgagaaattggaccgggaggagctg
tgcggccccacagagccctgtgtcttacctttccaggtgttactagaaaatcccttgcaa
ttttttcaggcggagctgcggattagggacataaatgatcattccccagttttcctagac
aaagaaatactattgaaaatttcagaaagtatcactcctggaactactttcttaatagaa
cgtgcccaggacttggatgtaggaaccaacagtctccaaaattacacaatcagtcccaat
ttccacttccatcttaatttacaagacagtctcgatggcataatgttaccacagctggtg
ctgaacagagccctggatcgcgaggagcagcctgagatcaggttaaccctcacagcgcta
gatggcgggactccacccaggtccggcacggccctggtacggattgaagttatggacatc
aatgacaacgtcccagagtttgcaaagctgctctatgaggtgcagatcccggaggacagc
cctattggatcccaggttgccatcgtctctgccagggatttagacattggaactaatgga
gaaatatcttatgcattttcccaagcctctgaagacattcgcaaaacgtttcgattaagt
gcaaaatcgggagaactccttttaagacagaaactggatttcgaatccatccagacgtac
acagtaaatattcaggcgacagatggtgggggcctatctggaacttgtgtggtatttgtc
caagtaatggatttgaatgacaatcctccggaactgactatgtcgacacttatcaatcag
atcccagaaaacttgcaggatacccttattgctgtattcagtgtttcagatcctgactcc
ggagacaacggaaggacagtgtgctccatccaagatgatcttccttttttcttgaaacct
tctgttgagaacttttacactctggtgataagcacagccctggaccgggagaccagatcc
gaatacaacatcaccatcaccgtcaccgacttggggacacccaggctgaaaatcgagcac
aacataaccgtgctggtctccgacgtcaatgacaacgcccccgccttcacccaaacctcc
tacaccctcttcgtccgcgagaacaacagccccgccctgcacatcggcagtgtcagcgcc
acagacagagactcaggcaccaacgcccaggtcacctactcgctgctgccaccccgggac
ccgcacctgcccctcgcctccctggtctccatcaacgcagataacggccacctgttcgcc
ctccagtcgctggactacgaggccctgcaggagttcgagttccgcgtgggcgccacagac
cgcggctccccggagctgagcagcgaggcgctagtgcgcgtgctggtgctggacgccaac
gacaactcgcccttcgtgctgtacccgctgcagaacggctccgcgccctgcaccgagctg
gtgccccgggcggccgagccgggctacctggtgaccaaggtggtggcggtggacggcgac
tcgggccagaacgcctggctgtcgtaccagctgctcaaggccacggagcccgggctgttc
ggtgtgtgggcgcacaatggcgaggtgcgcacctccaggctgctgagcgagcgcgacacg
gccaagcacaggctagtggtgctggttaaggacaatggcgagcctccgcgctcggccacc
gccacgctacacttgctcctggtggacggcttctcccagccctacctgccgctcccggag
gcggccccggcccaggcccaggccgactcactcaccgtctacctggtggtggcgttagcc
tcggtgtcgtcgcttttcctcttgtcggtgctcctgttcgtggcggtgtggctgtgcagg
aggagcagggcggcctcagtgggtcgctgctcggtgcccgagggcccctttccagggcat
ctggtggacgtgagcggcaccgagaccctgtcccagagctaccagtacgaggtgtgtctg
actggaggctccgggacaaatgagttcaagttcctgaagccaattatccctaattttgtt
gctcagggtgcagagagggttatcgaggcaaatcccagtttcaggaagagctttgaattc
agttaa
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