Chlorocebus sabaeus (green monkey): 103245178
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Entry
103245178 CDS
T04361
Name
(RefSeq) protocadherin beta-17
KO
K16494
protocadherin beta
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csab04515
]
103245178
Cell adhesion molecules [BR:
csab04515
]
Cadherins
Protocadherins
103245178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
103245178
NCBI-ProteinID:
XP_008013803
LinkDB
All DBs
Position
23:43774538..43785507
Genome browser
AA seq
1589 aa
AA seq
DB search
MQTKVQNKKRQVAFFILLMLWGEVGSESIQYSVLEETESGTFVANLTKDLGLRVGELAAR
GARVVFKGNRQHLQLDPQTHDLLLNEKLDREELCGSTEPCVLPFQVLLENPLQFFQASLR
VRDINDHSPEFPAREMLLKISEITMPGKIFPLKMAHDLDTGSNGLQSYTISSNPHFHVLT
RNRSEGRKFPELVLDKPLDREEQSRLTLTLTALDGGSPPRSGTSEIHIQVLDINDNIPEF
AQELYEAQIPENNPLGSLVITVSARDLDAGSFGKVSYALFQVDDINQPFEINAITGEIRL
RKALDFEEVQSYDVDVEATDGGGLSGKCSLVVRVLDVNDNAPELTMSFFISPIPENLPEI
IVAVFSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTLVTEGALDRESRAEYNITITV
TDLGTPRLKTQQSITVLVSDVNDNAPAFTQTSYTLFVRENNSPALHIGSVSATDRDSGTN
ARVTYSLLPPQDPHLPLPSLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPVLSS
EALVRVLVLDANDNSPFVLYPLQKGSGPCTELVPRAAEPGYLVTKVVAVDGDSGQNAWLS
YQLLKATEPGLFGVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPRSATATLHLVLV
DGFSQPYLPLPEAAAAQAQDDSLTVYLVVALASVSSLFLLSVLLFVAVRLCRRSRAASVG
RCSVPEGPFPGHLVDVSGTGTLSQSYQYEVCLMGGSGTNEFKFLKPIIPNFPPQGTEREM
EETPAFPNSFPFRMMETPLPKAPEKRQVTAIIFLLLLWEAGSATIKYSVLEERDSGSFVA
NLAKDLGLGVGELAARGARILSKGNKQYLQLEQKSGNLLLKEKLDREELCSDIDPCILHF
QMLLKNPVQFIQGELQLQDVNDHAPEFLENEILLKISEGSHPGTSFPLKIAQDLDVGSNT
VQNYTISTNSYFHLFTRNHSDGKKYPELVLDQALDREEQPQLRLTLTALDGGSPPRIGTS
HVLIVIVDINDNVPEFTQRLYEVQVPENAPIGSLVITVSARDLDAGTHGELSYSFFQYSN
QIIQAFEINSITGEIRLKKALDFEEIQSYHMEVEASDGGGLSGTCTVAIEVMDINDNAPE
ITMSLLISDIPENSPETVVAVFGISDPDSGNNGKMMCSIQDHLPFLIKPTLENFYTVLTE
GALDRESWAEYNITITVTDLGTPRLKTEYNITVRVSDVNDNAPAFTQTSYNLFVRENNSP
ALHIGSVSATDRDSGTNAQVTYSLLPPQDSHLPLASLVSINADNGHLFALRSLDYEALQE
FEFRVGAADRGFPELSSEALVRVLVLDTNDNSPFVLYPLQNGSAPCTELVPRAAELGYLV
TKVVAVDGDSGQNAWLSYQLLKATEPGLFGVWAHNGEVRTSRLLSERDAAKHRLVVLVKD
NGEPPRSATATLHLLLVDGFSQPYLPLPEAAPAQAQADSLTVYLVVALASVSSLFLLSVL
LFVAVRLCRRSRAASVGRYLVPEGAFPGHLVDVSGTGTLSQNYQYEVYLAESSESQFKFL
KPILPNFLGEGTGRDSEANSNSRNDFGFN
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactaaagtacagaacaagaaaaggcaagtggcgttcttcattttattgatgctt
tggggagaggtaggttctgaatcgattcagtattccgtattggaggagacagaaagtggc
acgtttgtggccaacttgacaaaggacctgggactgagggtgggggagctggctgcacgg
ggcgctcgggttgttttcaaagggaacagacaacatttgcagcttgatccacagacccat
gatttactgctaaatgaaaaactggaccgggaggaactgtgtggctccactgagccgtgt
gtgctacctttccaagtgttactggaaaaccccttgcagttttttcaggcttccttgcga
gtcagagatataaatgaccactccccggaattccctgccagagaaatgctcctgaaaata
tcagaaattactatgccaggaaagatatttcctttgaaaatggcacacgatttagacact
ggcagcaatggccttcagagctacacaatcagctccaaccctcacttccacgttctcacc
cgcaatcgcagcgaaggcagaaagttcccggagctggtgctggacaaaccgttggaccgc
gaggagcagtcccgactcacgctaacgctcaccgcgctggatggtgggtctccgccccgg
tcagggacctccgagattcacatccaggttttggacatcaatgacaacatccccgagttt
gctcaggagctctatgaggcacaaatccctgagaacaatcccctcggctctctggttatt
accgtctcagccagagatttagatgcaggatcgtttgggaaggtatcttacgccctgttt
caagtcgatgacatcaaccaaccgttcgaaataaacgcaatcacaggagaaattcgtttg
agaaaggctttggattttgaggaagttcagtcttatgacgtggatgttgaggctacggat
ggtgggggcctatcaggaaaatgctctttagtcgtcagggtcctggacgtgaatgacaac
gcccctgaactcaccatgtcgttcttcatcagccccatcccagaaaacttgccagagatc
atagtggcagttttcagtgtttcagatgcagactctgggcataaccaacaggttatttgt
tcaatagagaacaatctcccttttctactaagaccttccgtggagaatttctacaccctg
gtaacagaaggggcactggacagagagagcagagccgagtacaacatcaccatcaccgtc
actgatttggggacacccaggctgaaaacccagcagagcataaccgtgctggtctccgac
gtcaatgacaacgcccccgccttcacccaaacctcctacaccctgttcgtccgcgagaac
aacagccccgccctgcacattggcagtgtcagcgccacagacagagactcaggcaccaac
gccagggtcacctactcgctattgccgccccaggacccgcacctgcccctcccctccctg
gtctccatcaacgcagacaatggccacctgttcgccctcaggtctctggactacgaggcc
ttgcaggagttcgagttccgcgtgggcgccacagaccgcgggtccccggtgctgagcagc
gaggcgctggtgcgcgtgctggtgctggacgccaacgacaactcgcccttcgtgctgtac
ccgctgcagaagggctccggcccctgcacagagctggtgccccgggccgccgagccgggc
tacctggtgaccaaggtggtggcggtagacggcgactcgggccagaacgcctggctgtcg
taccagctgctcaaggccacggagcccgggctgttcggcgtgtgggcgcacaatggcgag
gtgcgcactgccaggctactgagcgagcgtgacgcggccaagcacaggctggtggtgctg
gtcaaggacaacggcgagcctccgcgctcggccaccgccacgctgcacttggtcttagtg
gacggcttctcccagccctacctgcctctcccggaggcggctgcggcccaggcccaggac
gactcgctcaccgtctacctggtggtggcattggcctcggtgtcttcgctcttcctcttg
tcggtgctcctgttcgtggcggtgcggctgtgcaggaggagcagggcggcctcggtgggt
cgctgctcggtgcccgagggcccctttccagggcatctggtggacgtgagcggcaccggg
accctgtcccagagctaccagtacgaggtgtgtctgatgggaggctcaggaacaaatgag
ttcaagttcctgaagccgattatccccaacttccctcctcagggcactgagagagaaatg
gaagaaacccccgcctttccgaatagcttcccattcagaatgatggagacgccgctcccc
aaagcaccagagaaaaggcaagtgaccgccattatttttttattactactgtgggaggcg
ggcagcgctaccattaagtattcagttctagaagagagggacagcggctcttttgtggcc
aacttagcaaaagatctgggactgggtgtaggggaactggccgcaaggggcgcccggatt
ctttccaaagggaataaacagtatttgcagctcgaacagaagagtgggaatttgctccta
aaagaaaaattggaccgggaggagttgtgcagtgacatagatccatgtatactgcatttc
cagatgttattgaaaaatccggtgcagtttattcaaggtgaactacagctccaagatgta
aatgaccatgccccagaattcttggaaaatgaaatcctcctgaaaatctctgaaggcagc
catccagggacttcatttcctttgaaaatagctcaagatttggacgtaggtagcaacaca
gttcagaactacacaattagcaccaactcctatttccaccttttcactcgcaatcacagc
gacggcaagaaatacccagagctcgtgctggatcaagcgctggaccgcgaggagcagccc
cagctcaggttaaccctcacagcgctggatggtgggtcaccgcccagaattgggacttcc
catgttctcatagtgattgtagatatcaatgacaacgtccctgaatttactcagcggctc
tacgaggtgcaggtcccagaaaacgcccctataggttccctcgtcatcaccgtctctgcc
agggatttagatgctgggacccatggggagctctcctactcattttttcaatactcaaat
caaatcattcaggcctttgaaataaactcaatcacgggagaaattagattaaaaaaggcg
ttggattttgaggaaattcaatcttaccatatggaagttgaggcctcagacggtgggggt
ctttcaggaacatgcaccgtagccatagaagtgatggatataaacgacaacgcaccggaa
attaccatgtccttactcatcagtgatatcccagaaaactccccagaaacagtggtcgct
gttttcggaatttcggatccggactctgggaacaatggaaaaatgatgtgttccatccaa
gaccacctccctttccttataaagcctaccttagaaaatttctacaccgtgttaacggaa
ggagcgctagatagagagagctgggccgagtacaacatcaccattactgtcacagacttg
gggacacccaggctgaaaaccgagtacaacataaccgtgcgggtctccgacgtcaacgac
aacgcccccgccttcacccaaacctcctataacctgttcgtccgcgagaacaacagcccc
gccctgcacatcggcagtgtcagcgccacagacagagactcaggcaccaacgcccaggtc
acctactcgctgctgccaccccaggactcgcacctgcccctcgcctccctggtttccatc
aacgcagacaacggccacctgtttgccctccgatcgctggactacgaggccctgcaggag
ttcgagttccgcgtgggcgccgcagaccgcggcttcccggagctgagcagcgaggcgctg
gtgcgcgtgctggtgctggacaccaacgacaactcgcccttcgtgctgtaccctctgcag
aacggctccgcgccctgcaccgagctggtgccccgggcggccgagctgggctacctggtg
accaaggtggtggcggtggacggcgactcgggccagaacgcctggctgtcgtaccagctg
ctcaaggccacggagcccgggctctttggcgtgtgggcgcacaatggcgaggtgcgcacc
tccaggctgctgagcgagcgcgacgcggccaagcacaggctggtggtgctggtcaaggac
aatggcgagcctccgcgctcggccactgccacgttgcacttgctcctggtggacggcttc
tcccagccctacctgccgctcccggaggcggccccggcccaagcccaggccgactcgctc
accgtctacctggtggtggcgttggcctcggtgtcgtcgctcttcctcttgtccgtgctc
ctgttcgtggcggtgcggctgtgcaggaggagcagggcggcctcggtgggtcgctacttg
gtgcccgagggcgcctttccagggcatctggtggacgtgagcggcaccgggaccctgtcc
cagaattatcagtatgaagtttacctggcagaaagctctgagagccaattcaagtttctt
aaaccgatacttcccaacttcttgggtgaagggactggcagggacagcgaggcaaactcc
aactccaggaatgattttgggttcaattag
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