Chlorocebus sabaeus (green monkey): 103245809
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Entry
103245809 CDS
T04361
Symbol
VPS18
Name
(RefSeq) VPS18, CORVET/HOPS core subunit
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab04140
Autophagy - animal
csab04148
Efferocytosis
csab05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103245809 (VPS18)
04148 Efferocytosis
103245809 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
103245809 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csab04131
]
103245809 (VPS18)
Membrane trafficking [BR:
csab04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
103245809 (VPS18)
Hops complex
103245809 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_5
zf-C3HC4_2
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
WD40_Prp19
CNH
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
103245809
NCBI-ProteinID:
XP_008015179
Ensembl:
ENSCSAG00000007611
UniProt:
A0A0D9R5I6
LinkDB
All DBs
Position
26:complement(42091348..42100264)
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AA seq
973 aa
AA seq
DB search
MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSSNQLCMSLGKDTLLRIDLGKASEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAE
AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL
KAAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEVQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAKGSARAKEAEGGTATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEQLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgagtacgagaactcgctgtcccgctcggccgtcttgcagccc
ggctgccctagcgtgggcatcccccactcggggtatgtgaatgcccagctggagaaggaa
gtgcccatcttcacaaagcagcgcattgacttcaccccttccgagcgcatcaccagtctt
gtcgtctccagcaatcagctctgcatgagcctgggcaaggatacgctgctccgcattgac
ttgggcaaggcaagtgagcccaaccacgtggagctgggacgtaaagatgatgcaaaagtt
cacaagatgttccttgaccatactggctctcacttgctgattgccctgagcagcacggag
gtcctctacgtgaaccgaaatggacagaaggtacggccactagcacgctggaaggggcag
ctggtggagagtgtgggttggaacaaggcactgggcaccgaaagcagcacaggccccatc
ctggttgggactgcccaaggccacatctttgaagcagagctctcagccagcgaaggtggg
cttttcggccctgctccggatctctacttccgcccattgtacgtgctcaatgaagaaggg
ggtccagcacctgtgtgctcccttgaggctgagcggggccctgacgggcgtagcttcgtt
attgccaccactcggcagcgcctcttccagttcataggccgagcagcagagggggctgag
gcccagggtttctcagggctctttgcagcttacacggaccacccacccccattccgtgag
tttcccagcaacctgggctacagtgagctggccttctacactcccaagctgcgctccgca
ccccgggcctttgcctggatgatgggggatggtgtgttgtatggggcattggactgtgga
cgccctgactctctgctgagcgaggagcgagtctgggagtacccagagggggtagggcct
ggggccagcccacccctagccatcgtcttgacccagttccacttcctgctgctgctggca
gaccgggtggaggcggtgtgcacactgaccgggcaggtggtgctgcgggatcacttcctg
gagaaatttgggccactgaagcacatggtgaaggactcctccacaggccagctgtgggcc
tacactgagcgggctgtcttccgctaccatgtgcaacgggaggcccgagatgtctggcgc
acctatctggacatgaaccgcttcgatctggccaaagagtattgccgagagcggcccgac
tgcctggacacggtcctggcccgggaggccgatttctgctttcgccagcgtcgctacctg
gagagcgcacgctgctatgccctgacccagagctactttgaggagatagccctcaagttc
ctggaagcccgacaggaggaggctctggctgagttcctgcagcgaaaactggccagtttg
aaggcagccgagcgtacccaggctacactgctgaccacctggctgacagagctctacctg
agccggcttggggctctacagggtgacccagaggccctgaccctctaccgagaaactaag
gaatgctttcgtaccttcctcagcagcccccgccacaaagagtggctctttgccagccgg
gcctctatccatgagctgctcgccagtcatggggacacagagcacatggtgtactttgca
gtgatcatgcaggactatgagcgggtggtggcttaccactgtcagcacgaggcctacgag
gaggccctggctgtgctcgcccgccaccgcgacccccagctcttctacaagttctcaccc
atcctcatccgtcacatcccccgccagcttgtagatgcctggattgagctgggcagccgg
ctggatgctcggcagctcatccctgccctggtgaactacagtcagggtggtgaggtccag
caggtgagccaggcgatccgctacatggaattctgcgtgaacgtgctgggggagactgag
caggccatacacaactacctgctgtcgctgtacgcccgtggccgaccagactcgctgctg
gcttatctcgagcaggctggggccagcccacaccgggtgcattacgacctcaagtatgcg
ctgcggctctgtgctgagcatggccaccaccgcgcttgtgtccacgtctacaaggtccta
gagctgtatgaggaggctgtggacctggccctgcaggtggacgtggacctggctaagcag
tgtgcagacctgcctgaggaggatgaggaattgcgcaagaagctgtggctgaagatcgca
cggcacgtggtgcaggaggaggaagatgtgcagacagccatggcttgcctggctagctgc
cccttgctcaagattgaggatgtgctgcccttctttcctgatttcgtcaccatcgaccac
ttcaaggaggcgatctgcagctcacttaaggcctacaaccaccacatccaggagctgcag
cgggagatggaagaggctacagccagtgcccagcgcatccggcgagacctgcaggagctg
cggggccgctacggcactgtggagccccaggacaaatgtgccacctgcgacttccccctg
ctcaaccgccctttttacctcttcctctgtggccatatgttccatgctgactgcctgctg
caggccgtgcgacctggcctgccagcctacaagcaggcccggctagaggagctgcagagg
aagctgggggctgctccacccccagccaagggctctgcccgggccaaggaggccgagggt
gggactgccacggcagggcccagccgggaacagctcaaggctgacctggatgagttggtg
gccgctgagtgtgtgtactgtggggagttgatgatccgctctattgaccggccgttcatc
gacccccagcgctacgaggaggagcagctcagttggctgtag
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