Chlorocebus sabaeus (green monkey): 103247372
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Entry
103247372 CDS
T04361
Symbol
THOC2
Name
(RefSeq) THO complex 2
KO
K12879
THO complex subunit 2
Organism
csab
Chlorocebus sabaeus (green monkey)
Pathway
csab03013
Nucleocytoplasmic transport
csab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103247372 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
103247372 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csab03019
]
103247372 (THOC2)
03041 Spliceosome [BR:
csab03041
]
103247372 (THOC2)
Messenger RNA biogenesis [BR:
csab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103247372 (THOC2)
Spliceosome [BR:
csab03041
]
Complex C
Other components
EJC/TREX
103247372 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103247372 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
103247372
NCBI-ProteinID:
XP_008017667
Ensembl:
ENSCSAG00000018332
LinkDB
All DBs
Position
X
Genome browser
AA seq
1642 aa
AA seq
DB search
MAAAAVVVPAEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGSITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIAEAKQIVRKLTMVVLSSEKMDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLCYDRV
FSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKRPDLYALAMGVEVYLLPSGDYGRLCDHVPTGCYSGQLKSRKS
YMIPENEFHHKDPPPRNAVASVQNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGV
KAVNKASSTTPKGNSSNGNSGSNSNKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKD
GKEKPKEERPNKDEKARETKERTPKSDKEKEKFKKEEKAKDEKFKTTVPNAESKSTQERE
REKEPSRERDIAKEMKSKENVKGGEKTPVSGSLKSPVPRSDIPEPEREQKRRKIDTHPSP
SHSSTVKVTAILPKVPLGSENYASSPVISIHFLQDSLIELKESSAKLYINHTPPPLSKSK
EREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVPPDLTKRRKEENGTMGVSK
HKSESPCESPYPNEKDKEKNKSKSSGKEKGSDSFKSEKMDKISSGGKKESRHDKEKIEKK
EKRDSSGGKEEKKHHKSSDKHR
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcggctgtggtggttcccgcagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgtcggattctcagtgaaaataaaagccatgatagttcg
acgtatagagatttccagcaagctctctatgagttgtcatatcatgtaattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttaatgacattagtgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacagttggtattagcatgtttgtatttagtttcagac
acagttttaaaggaacgcctggatccagaaacactggaatcattagggcttatcaaacaa
tcacagcaattcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgccgaattgggg
caagatttatctggaagtattactagtgacttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacacgacgacttctttatatctttgttagaatcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatggc
gagacaccatcatctttatacagagttgcagcagtacttctgcaatttaatcttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa
cgagaaattgcagaagctaagcaaattgtcagaaagcttacgatggttgtgttgtcttct
gaaaaaatggatgagcgagagaaagaaaaggaaaaagaagaggagaaagtagagaagcca
cctgataaccaaaaacttggcttgttggaagccttattaaagatcggtgattggcaacat
gcacagaacattatggatcagatgcctccatactatgcagcttcacacaagctaatagcc
cttgctatttgcaagctcattcatataactattgagcctctctaccgaagagttggtgtt
cctaaaggtgctaaaggctcacctgttaatgctttgcaaaacaagagggcaccaaaacaa
gctgagagctttgaagatttgaggagagacgtgttcaatatgttctgttaccttggtcct
cacctttctcacgatcccattttatttgcaaaagtggtgcgcataggcaagtcatttatg
aaggagtttcagtctgatggaagcaaacaagaagataaagaaaaaacggaagttatcctt
agctgtttgcttagcattactgaccaggtactacttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactatggggaatgtttaaaacatttccatatcagcataga
taccgtctgtatggccagtggaagaatgaaacttataacagtcacccacttttagtaaaa
gttaaagctcaaacaatagacagagccaaatatatcatgaagcgcctaaccaaggaaaat
gtgaagccttctggaagacaaattgggaagttgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacaaaagtatgataacttaataacacctgtagtagattca
ttgaaatacctcacttcattgaattatgatgtcttggcctattgtatcattgaagcttta
gctaatccagaaaaggaaagaatgaaacatgatgacacaaccatctcaagctggcttcag
agtctggctagtttctgtggtgcagtttttcgtaaatatccaattgatcttgctggtctt
cttcagtatgttgccaatcagctaaaggcgggcaaaagttttgacctgcttatattgaaa
gaagtggtgcaaaaaatggcaggaatagaaattacagaggaaatgacaatggagcaacta
gaggctatgactggtggagagcagctaaaagctgagggtggttattttggtcagatcaga
aacactaaaaaatcctctcagagattaaaggatgctctattggaccatgatcttgccctt
cctctctgtctgcttatggctcagcagagaaatggggtaatctttcaggaaggtggagag
aaacatttaaaacttgtgggaaagctctatgaccagtgtcatgataccctggtgcagttt
ggtgggtttttagcatctaatctgagcacagaagattatataaagcgagtgccttcaatt
gatgtactctgtaatgaatttcatacaccccatgatgcagcatttttcctgtctaggcca
atgtatgcgcatcatatttcgtcaaagtatgatgaacttaaaaaatcagaaaagggaagt
aaacagcaacataaagttcataagtacattacatcatgtgagatggtgatggcacctgtc
catgaagcagtggtctccttacatgtttccaaagtctgggatgacatcagccctcaattc
tatgccacattctggtcattgacaatgtatgaccttgcagttccacacaccagctatgaa
cgagaagtcaataaacttaaagtccagatgaaagcaattgatgacaatcaggaaatgccc
ccaaataaaaagaaaaaagagaaggagcgctgtactgcccttcaggacaagcttcttgaa
gaagaaaagaaacagatggaacatgtacagagagttctacagagattgaaactggaaaag
gacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgccgtttactgtgctcgttttgtt
gaattggtacatcaacagaaaactccaaatttttccacacttctttgctatgatcgagtt
ttctctgacataatttacacagttgcaagctgtactgaaaatgaagccagtcgatatgga
aggtttctgtgctgcatgttagagactgtgaccaggtggcatagtgatagagccacatat
gaaaaggaatgtggaaactatccaggattccttaccatattacgggcaactggttttgat
ggtggaaataaggctgatcaattagactatgaaaattttcgacatgttgtacataaatgg
cattacaaactaaccaaggcatcggtacattgccttgaaacaggcgaatatactcacatc
aggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaagttttgaatctg
ggtcaagctttggaaagaagagtacacaaaatctgccaagaagaaaaagagaagaggcca
gatctatatgcattggctatgggtgttgaagtttatcttctgccttcaggagattatggg
agattatgcgatcatgttcccacaggctgctactctgggcagttgaaaagtagaaagtca
tacatgatacctgaaaatgagtttcatcacaaagacccccctccgaggaatgcagttgcc
agtgtgcaaaatgggcctggtggtgggccttcatcatcatcaataggaagtgcatctaaa
tcggatgaaagcagtactgaggagactgataaatcaagggagagatctcagtgtggtgtg
aaagctgttaataaagcttctagcaccacacctaaagggaattcaagcaatggaaatagt
ggctctaacagcaacaaagctgttaaagaaaatgacaaagaaaaagggaaagagaaagaa
aaagagaaaaaagaaaagactccagctactactccagaggccagggtacttggtaaagat
ggtaaagaaaaaccaaaggaagagcggccaaataaagatgaaaaagcaagagagaccaag
gaaagaacgccaaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaagctaaa
gatgagaaatttaagaccactgtccccaatgcagaatcaaaatcaactcaagaaagggaa
agagagaaggagccatccagagaaagagatatagcaaaggaaatgaaatcaaaggaaaat
gttaaaggaggagaaaaaacgccagtttctgggtccttgaaatcacctgttccccgatca
gatattccagagcctgaaagggaacaaaaacgccgcaaaattgatacccacccttctcca
tcacattcctccacagtaaaggttacagccatacttcccaaagttcctctgggttctgag
aactatgccagctcacctgtcatctccattcattttctacaggacagtctcatcgaactc
aaggaatcttcagcaaagctctacattaatcatactcctccaccactgtccaagagtaag
gagagagaaatggacaagaaagatttggacaagtcaagggaaagatccagagaaagagag
aaaaaagatgaaaaggacaggaaagagcggaaaagggatcactcaaacaacgaccgtgaa
gtgccaccggacttaaccaagcgacgtaaagaggagaatggaacaatgggggtttcaaaa
cataaaagtgaaagtccttgtgaatctccttatccaaatgagaaagacaaggaaaaaaat
aagtcaaaatcttcaggcaaagaaaaaggcagtgattcatttaaatctgagaagatggat
aaaatctcctccggtggcaaaaaggagtccaggcatgataaagaaaagatagaaaagaaa
gagaaacgggacagttcaggaggaaaggaagagaagaaacatcataagtcctcggacaag
cacagataa
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integrated database retrieval system