Chlorocebus sabaeus (green monkey): 103248962
Help
Entry
103248962 CDS
T04361
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
csab
Chlorocebus sabaeus (green monkey)
Brite
KEGG Orthology (KO) [BR:
csab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csab03037
]
103248962
Cilium and associated proteins [BR:
csab03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
103248962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_19
TPR_7
TPR_8
TPR_14
TPR_6
TPR_16
TPR_11
ANAPC3
ARM_TT21_4th
TPR_9
TPR_17
TPR_CcmH_CycH
TPR-S
TPR_Slam
TPR_21
ARM_TT21_C
TPR_15
HEAT_Nup120
HAT_PRP39_C
DUF6584
ARM_TT21_2nd
Motif
Other DBs
NCBI-GeneID:
103248962
NCBI-ProteinID:
XP_008019840
Ensembl:
ENSCSAG00000018115
LinkDB
All DBs
Position
3:complement(435649..546661)
Genome browser
AA seq
824 aa
AA seq
DB search
MMQNVHLAPETDEDDLYSGYNDYNPIYDIEELENDAAFQQAVRTSHGRRPPITAKISSTA
VTRPIATGYGSKTSLSSSMGRPMTGAIQDGVTRPMTAVRAAGFTKAALRGSAFDPLGQSR
GPAPPLEAKKKDSPEEKIKQLEKEVNELVEESCIASSCGDLKLALEKAKDAGRKERVLVR
QREQVTSPENINLDLTYSVLFNLASQYSVNEMYAEALNTYQVIVKNKMFSNAGMLKMNMG
NIYLKQRNYSKAIKFYRMALDQVPSVNKQMRIKIMQNIGVTFIQAGQYSDAINSYEHIMS
MAPNLKAGYNLTICYFAVGDREKMKKAFQKLIAVPLEIDEDKYISPSDDPHTNLVTEAIK
NDHLRQMERERKAMAEKYIVTSAKLIAPVIETSFAAGYDWCVEVVKASQYVELANDLEIN
KAVTYLRQKDYNQAVEIFKMLEKKDSRVKSAAATSLSALYYMGKDFAQASSYADIAVNSD
RYNPAALTNKGNTVFANGDCEKAAEFYKEALRNDSSCTEALYNIGLTYEKLNRLDEALDC
FLKLHAILQNSAEVLYQIANIYELMENPSQAIEWLMQVVSVVPTDPQVLSKLGELYDHEG
DKSQAFQYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFERAFLIQPTQVKWQLMV
ASCFRRSGNYQKALDTYKDTHRKFPENVECLRFLVRLCTDLGLKDAQEYARKLKRLEKMK
EIREQRIKSGRDGSGGSRGKREGSASGDSGQNYSASSKGERLSARLRALPGTNEPYESSS
NKEIDASYVDPLGPQIERPKTAARKRIDEDDFADEELGDDLLPE
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaatgtgcacctggctccagagacagatgaagatgatctttattcgggctat
aatgactacaatccaatctatgatatcgaggaattggagaatgatgcagcttttcagcaa
gctgtgaggactagtcatggcagaagacctccaataactgctaaaatatcaagcacggca
gttactagacctatagctactggatatgggtccaagacatctctgtcatcatcaatggga
agaccaatgacaggggctattcaggatggagttactagacccatgacagcagtgagagca
gctggttttaccaaagcagctttgagaggctctgcatttgaccctcttggtcagtcaagg
ggccctgctccccctttggaagccaagaaaaaagatagcccagaagaaaaaataaagcaa
ttagagaaggaagtaaatgagttggtagaagaaagctgtattgccagtagttgtggagac
ttaaaattggccttagaaaaggcaaaagatgcgggaagaaaagagagagtcctggtgaga
cagcgagaacaagttacaagtccagaaaatatcaatttggatttaacttactcagttctt
ttcaatttggccagtcagtattcagttaatgaaatgtatgccgaagcacttaacacatat
caagttatagtgaaaaataagatgtttagcaatgcaggaatgttgaaaatgaatatggga
aatatctatttaaagcaaagaaattattccaaagccattaaattctaccgaatggcatta
gaccaagttccaagtgtcaataagcaaatgaggattaaaataatgcagaacattggagtt
acatttattcaggctggtcagtattcggatgctattaattcatatgagcacataatgagc
atggcaccaaatctgaaggcaggctacaacctcactatctgttattttgctgttggagac
cgagaaaaaatgaagaaagcattccaaaagttgattgctgttccattagaaattgatgaa
gataaatatatttcaccaagtgatgatcctcatactaacttagtaactgaagctataaaa
aatgatcacctcaggcaaatggaacgtgaaaggaaagccatggcagaaaaatacattgtg
acatctgcaaaactcattgctcctgtaattgaaacatcgtttgctgcaggttatgattgg
tgtgtggaagtggtgaaagcttctcaatatgtagagctagccaatgatctggaaataaac
aaagcagttacatacttgagacaaaaggactataaccaggctgtagagatctttaaaatg
ttggaaaaaaaggacagtagagtgaaaagtgcagctgcaaccagtctctcagccctgtat
tatatgggaaaggattttgcacaagccagcagctatgcagatatagctgtgaactctgat
agatataatccagcagctcttactaataaagggaatacagtttttgcaaatggtgattgt
gagaaggccgctgaattctataaagaggctctaagaaatgattcttcttgtactgaagcg
ctttataatattggccttacctatgagaaactaaatcggctggatgaggctttggactgt
ttcctgaaacttcatgcaatcctacaaaacagtgccgaagttctttaccagatagcaaat
atatatgaattaatggaaaatcccagtcaagctattgaatggctaatgcaggtggtcagt
gttgttccaaccgatcctcaagttttatctaaactgggagaattatatgatcatgaagga
gataaatctcaagcatttcaatattactatgagtcatataggtattttccttgtaatatt
gaagtcattgagtggcttggagcctattacattgacacccagttttgggaaaaagccatt
cagtactttgaaagagcttttcttatacagcctacacaagtgaaatggcagctgatggta
gctagttgttttagaagaagtggtaactaccaaaaagcattagatacttataaagatact
cacagaaaatttccagaaaatgtcgaatgtctgcgtttcttggttcgtctctgcacagat
cttggattaaaagatgctcaagaatatgccagaaaactgaagaggttggaaaaaatgaaa
gaaataagggaacagcgcataaagtcaggcagagatggcagtgggggctcccgtggcaaa
agagaaggaagtgctagcggtgatagtggccagaactatagtgccagtagtaaaggtgaa
cgtctaagtgccagactcagagctttacctgggacaaatgaaccttatgaaagtagcagt
aacaaagaaatagatgcctcctatgtggacccgcttggccctcaaatagaaagaccaaaa
actgcagccagaaaaaggatcgatgaggatgattttgctgatgaagaattaggagatgat
ttgcttccagaataa
DBGET
integrated database retrieval system
