Chitinophaga sancti: SIO70_00010
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Entry
SIO70_00010 CDS
T09582
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
csac
Chitinophaga sancti
Pathway
csac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SIO70_00010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csac03021
]
SIO70_00010
Transcription machinery [BR:
csac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SIO70_00010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_38
Phage_CP76
HTH_DeoR
HTH_Tnp_ISL3
RCS1
MarR_2
HTH_11
IL11
VPS51_Exo84_N
HTH_PafC
HTH_29
Motif
Other DBs
NCBI-ProteinID:
WPQ63245
LinkDB
All DBs
Position
1579..2133
Genome browser
AA seq
184 aa
AA seq
DB search
MHLMPKDCQHTHWDAIRTGNEDAFRQLFELHWQDLFTYACRITRDPATAQDAVQSVFIHL
WEKHTTLPPVTAVLPYLRTALKHRLLNAMRDENLYQKHVDTFHQVAENHHATPAHEQLHL
KETEQQLLQSINRLPERMKEVFYMNRVEDLSVAEIALRLGSSPQTIRNQLNTALQRIKHI
FIVE
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcaccttatgccaaaagattgtcaacatacacactgggatgctatccgcacgggtaat
gaagacgctttccgtcagctcttcgagctgcactggcaggacctcttcacctacgcgtgt
cgtatcacccgcgatcccgccactgcgcaggacgcggtccaaagtgtattcatccatctc
tgggaaaaacataccaccctcccccctgtcaccgccgtactcccatacctacgcaccgcc
ctcaaacatcgacttctcaacgctatgcgcgatgaaaacctctaccaaaaacatgtcgat
acctttcaccaggtagccgaaaaccatcatgctacccccgctcacgaacaactccacctc
aaagaaaccgaacaacaattattacaatccatcaatcgcctgcccgaacgcatgaaggaa
gtcttttacatgaatagagtggaagacctttctgtcgctgaaatcgccctgcgactgggt
tccagccctcaaacgatccgtaatcaactcaatacagcgcttcagcggattaaacatatt
tttattgtagaataa
DBGET
integrated database retrieval system
