Chitinophaga sancti: SIO70_00715
Help
Entry
SIO70_00715 CDS
T09582
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
csac
Chitinophaga sancti
Pathway
csac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SIO70_00715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csac03021
]
SIO70_00715
Transcription machinery [BR:
csac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SIO70_00715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
UPF0122
HTH_38
HTH_28
GerE
UBR4_TPR
YfeC-like
HTH_40
Terminase_5
HTH_23
HTH_10
Motif
Other DBs
NCBI-ProteinID:
WPQ63383
LinkDB
All DBs
Position
194697..195248
Genome browser
AA seq
183 aa
AA seq
DB search
MQSFESYNDEQLFLLLQAGSNEAFNILFERYRKRLFLEAFTRLQNEEEANDIVQEVFMWL
WNKRATLDIGNCLKPYLVRVVRNKVVDHVRKSTTARNHRQNYTWVADTHTNQLPMEAKEL
GKQLSEAINSITPASRLAFEQLYLQDKSLREIAIEMDINVQSVKNHIHRALKILRKNLKH
SLS
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtttcgaaagctataacgacgagcaactatttctgttactgcaggctggtagc
aatgaggcatttaacatcctcttcgaacgataccgtaagcgcctgttcctggaagccttc
acccggttgcaaaacgaggaggaggcaaatgacattgtacaagaggtattcatgtggctc
tggaataaaagggccacattggatattggcaattgcttaaagccatatcttgtaagagtc
gtaagaaacaaggtggttgaccatgttcgaaagtctactactgccagaaaccataggcaa
aactatacctgggtagcagatacccataccaaccaattacctatggaagcaaaagaactg
ggcaaacaactgtccgaagcaattaatagcattacgccggccagtcgcctggcttttgag
cagctatatttgcaagataaaagtctcagggaaattgctattgaaatggacattaatgta
caatccgttaaaaaccatattcaccgggcgctcaaaatccttcgaaaaaacttaaaacat
agtttgtcataa
DBGET
integrated database retrieval system
