Chitinophaga sancti: SIO70_02100
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Entry
SIO70_02100 CDS
T09582
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
csac
Chitinophaga sancti
Pathway
csac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SIO70_02100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csac03021
]
SIO70_02100
Transcription machinery [BR:
csac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SIO70_02100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
GerE
HTH_23
Sigma70_r2
HTH_38
HTH_Crp_2
DUF3489
HTH_40
HTH_7
CdiA_C
Sigma70_ECF
Sigma70_r3
Vinculin
HTH_29
DUF2774
HTH_28
DUF2316
HTH_24
RPA_C
Reb1_MybAD
DUF433
Motif
Other DBs
NCBI-ProteinID:
WPQ63653
LinkDB
All DBs
Position
complement(491729..492205)
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AA seq
158 aa
AA seq
DB search
MTKIPEIAEELTSDIFTGLWTGRELLVEVRNVKAFLSKVAYNKAMDFFRLTAHRQQLQAV
VAAQMAAGTVADADFKLLESETKRILQEAINSLSPQRKRIFIMHREQGMTHEQIAQALQL
SPETVKTTMSMALKSLRAFLSQHGLKSIAIIYYIDYWK
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaatccctgaaattgcagaagaattaacctctgacattttcaccggtctttgg
acaggacgggaattgctggttgaagtcaggaatgtaaaggcatttctttcgaaagtcgct
tataacaaagccatggattttttccgcctcacggctcaccgccagcaattacaggcagta
gtggcggcacaaatggctgcaggtactgtagcagatgctgatttcaaactgctggaatct
gaaaccaaacgcatattacaggaggccatcaacagcctaagcccacaaagaaaacggata
tttattatgcaccgggaacagggcatgacacatgaacaaattgcacaggcacttcagtta
tctcccgaaacagtcaaaacaaccatgtcaatggccctcaaaagcttacgtgcgttttta
tcccaacatggcctgaaaagtattgcaataatttactatatagactattggaaataa
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