Chitinophaga sancti: SIO70_04925
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Entry
SIO70_04925 CDS
T09582
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
csac
Chitinophaga sancti
Pathway
csac03030
DNA replication
csac03410
Base excision repair
csac03420
Nucleotide excision repair
csac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SIO70_04925 (polA)
03410 Base excision repair
SIO70_04925 (polA)
03420 Nucleotide excision repair
SIO70_04925 (polA)
03440 Homologous recombination
SIO70_04925 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csac03032
]
SIO70_04925 (polA)
03400 DNA repair and recombination proteins [BR:
csac03400
]
SIO70_04925 (polA)
Enzymes [BR:
csac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SIO70_04925 (polA)
DNA replication proteins [BR:
csac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SIO70_04925 (polA)
DNA repair and recombination proteins [BR:
csac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SIO70_04925 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SIO70_04925 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WPQ64205
LinkDB
All DBs
Position
1185465..1188281
Genome browser
AA seq
938 aa
AA seq
DB search
MQKKLFLLDAMALIYRAYYGLIRNPRLTSAGRNTNAQFGFTSTLIDLINKEKPTHMAVAF
DTHAPTERHTSFVDYKANREDAPEDLLDAIPDIKRIITGFNIPCVELDGYEADDVIGTLA
WQAAEAGYTVYMVTPDKDYGQLVKENVFIYKPPYMGSKEEILGPKEVCEKWQIKDVHQVI
DILGLMGDAVDNIPGIPGVGEKTAMKLLAQYDSIENVLANADKIGGKMGEKIKAGADSAI
LSKQLATIITDVPVTFHEEDFCIKDHNKEALSEVFIELEFKTLGKRILGDTFGSSSEVTT
NGKVQLDLFGNVTATSAAATTEDTPEQIVSILVAEKNINNTPHNYHLADTPEKRAELLAT
LLSKQEVCFDTETTGTDANAVDLVGMSFSFAAGEAWYVPVPADKAGAQAIVDEFRPLFET
THIVFIGQNLKYDMLVLKWYGVEIKAPVFDTMLAHYLIEPEGRRSMDLLSAQYLQYEPVS
IETLIGKKGKNQGNMRDVEIDKIKDYAAEDADITLQLKEKFAPLLPAKNVEKVFYEVENP
LVKVLTDMEFEGIAIDIPALIDYSRELDTEIRRAEESVYTQAGVRFNLASPKQLGEVLFE
KLALDPKAKKTRTGQYATGEDVLAKLASKHQIVDDILVFRELSKLKSTYVDALPTMLNKR
TNRIHTSYNQAVAVTGRLSSTNPNLQNIPIRTDRGREIRKAFVPRNEEFTLLSADYSQIE
LRIIAAISEDQAMIDAFRQGIDIHAATAAKVYGIPLEEVTSEMRRNAKSVNFGIIYGVSA
FGLSENLGIPRSEAKMLIDNYFAQYQAIQHYMDKQKQFAQQNGYVETLLGRKRWLKDINS
SNAVVRGYAERNAINMPIQGTAADMIKLAMISIHKTMKEQNLRSKMILQVHDELVFDVHK
DEIEIIQPIILDGMRNALPLAVPVEAEIGLGRNWLEAH
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaaactttttttactggatgccatggctctcatatatcgcgcatactatggc
ctgatccggaaccctcgcctcaccagtgctggtcgtaacaccaatgcccagtttgggttt
acttccacgttgatagacctgatcaataaagaaaaacctacacacatggctgtggcattc
gatacgcatgcccctaccgaaagacatacctcctttgtcgattacaaagcgaaccgtgaa
gacgcacctgaagatctgcttgacgctattcctgatatcaaacgtattatcaccggtttc
aatatcccttgtgttgaattagacggttatgaagccgatgacgtaatcggcaccctggcc
tggcaggctgctgaagcgggttacaccgtatacatggtgacaccggacaaagactatggc
cagctcgtaaaagaaaacgtattcatttataaaccaccttacatgggtagcaaagaagaa
attcttggccctaaagaagtgtgtgaaaaatggcagatcaaagatgtgcaccaggtaatt
gatatcctggggctcatgggtgatgctgtcgacaatattcctggtattccgggggtagga
gagaagaccgccatgaaactgttagcccagtacgattctatcgaaaatgtactggccaat
gcagacaagatcggtggtaaaatgggagaaaagatcaaagctggtgcggatagcgccatc
ctctccaaacaactcgccactatcatcaccgatgtgcctgtgaccttccacgaagaagac
ttctgcatcaaagaccataacaaagaagctctctctgaagtcttcattgaactggaattc
aaaaccctgggcaaacgtattctcggcgatacctttggttccagtagtgaagttactact
aacggtaaagttcaactggatctattcggcaacgttaccgctacctctgcggcagctacc
actgaagatacccctgaacagatcgtaagtatcctcgttgctgaaaagaatatcaacaat
acaccacataactaccacctggcggacacacctgaaaaaagagcggaactgctggccaca
ctgctctccaaacaggaagtatgcttcgataccgaaacgacaggtaccgatgcaaatgca
gtagacctggtaggaatgagcttctcatttgcagccggcgaagcctggtatgtgcccgtg
cctgctgacaaagcaggtgcacaggccattgtagacgaattccgtccgctcttcgaaact
actcacatcgtattcattggccagaacctgaaatacgatatgctggtactcaaatggtat
ggtgtagagatcaaagcacctgtatttgatactatgcttgcccactacctaatagagccg
gaaggccgacgtagtatggacctgctcagcgcccagtacctgcaatacgaaccggtttct
atcgaaaccctcattggcaaaaaaggtaagaatcagggcaacatgcgcgatgtggagatc
gataagatcaaggactatgcagcagaagatgccgacattaccctgcagttaaaagaaaag
ttcgccccactgctacctgctaaaaacgtagaaaaggtattttatgaagtggaaaaccca
ctcgtgaaagtcctcaccgatatggagttcgaaggtatcgccatcgatatcccggcattg
atcgattactcccgcgagctggataccgaaatcagaagagcggaagaaagcgtatacacc
caggcaggtgtgcgtttcaaccttgcctctccgaaacaactgggtgaagtgctcttcgaa
aaactggcccttgatccgaaagcaaaaaagacccgtaccggtcaatatgctacaggtgag
gatgtactggcaaaactggccagcaagcaccagattgtagacgacatcctcgtattccgt
gagctgagtaagctgaaatctacctatgtagatgcattgccaaccatgcttaataaacgc
acaaacaggatacacacttcctataaccaggcagtagcagtgaccggccgtttgagcagc
accaacccgaacctgcagaatattccgatcagaactgacaggggcagggaaatccgtaaa
gcatttgtaccccgcaatgaagagtttaccctcctctctgcggattactcccaaatagaa
ctgcgcatcattgctgccatcagcgaagaccaggctatgatagacgctttccgccagggt
atagatatccacgcggctactgcggccaaggtatacggcattccgctggaagaggtaacc
tctgaaatgcgtcgcaatgccaagagcgtaaactttggtattatttacggtgtgagcgcc
ttcggtctttccgagaacctgggtattccacgtagtgaagcaaaaatgctgatcgataac
tacttcgcgcagtaccaggcgatccagcactacatggataaacagaaacagtttgcacag
cagaatggctatgtagaaaccctgctgggccgtaagcgctggctgaaagacatcaacagc
tccaacgcggtggtaagaggttatgcagaacgaaatgccatcaacatgcctattcagggt
actgctgccgacatgatcaagctggccatgatctccatccataaaacaatgaaggagcaa
aacctgcgttcaaaaatgatcctgcaggtacatgatgaattggtctttgatgttcataaa
gatgaaattgaaatcatccagccgatcatcctggatggtatgcgcaatgcactgccactg
gcggttccggtagaagctgaaataggccttggccgcaactggctggaagcccactaa
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