Chitinophaga sancti: SIO70_05945
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Entry
SIO70_05945 CDS
T09582
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
csac
Chitinophaga sancti
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csac03032
]
SIO70_05945
03036 Chromosome and associated proteins [BR:
csac03036
]
SIO70_05945
03400 DNA repair and recombination proteins [BR:
csac03400
]
SIO70_05945
DNA replication proteins [BR:
csac03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SIO70_05945
Chromosome and associated proteins [BR:
csac03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SIO70_05945
DNA repair and recombination proteins [BR:
csac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SIO70_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_1
Sulfolobus_pRN
Motif
Other DBs
NCBI-ProteinID:
WPQ64408
LinkDB
All DBs
Position
1417536..1417826
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AA seq
96 aa
AA seq
DB search
MRKADLINNIAEKTGIPKVDVLVTLEAMFKEVKEALANGEHIYIRGFGSFITKKRAAKIG
RNIKKNVAVEIPEHFIPAFKPSKEFVAEVKKLKSSS
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagctgacttaattaacaatattgctgaaaaaaccggcatacctaaagtagat
gtgttagtaacactagaagccatgtttaaggaggtcaaggaagcgttggctaatggcgag
catatctatattagaggttttggtagctttattacaaagaagagagcggccaagattggt
cgtaacattaagaagaatgtggcggtagaaattccagagcactttattcctgcattcaaa
ccttcgaaagaattcgttgctgaggtaaagaagcttaaaagttcttcgtaa
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