Chitinophaga sancti: SIO70_05960
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Entry
SIO70_05960 CDS
T09582
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
csac
Chitinophaga sancti
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csac01002
]
SIO70_05960
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csac01011
]
SIO70_05960
Peptidases and inhibitors [BR:
csac01002
]
Cysteine peptidases
Family C82
SIO70_05960
Peptidoglycan biosynthesis and degradation proteins [BR:
csac01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SIO70_05960
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WPQ64411
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Position
1420795..1422450
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AA seq
551 aa
AA seq
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MRNVPLFLLALAAVFASCNHEGKRKRQRVRDTSHYTQKDYIDLTLDSNAVNTFLQHDSSN
ASYIRSFYRQRNYHFAWIGNDGQLTEQAGNFINLMKSDAAFGLNDTSIISRPLREMYDTL
MMEGGKLKPDDKSVPQIELSLTAQFFAYGNKVWGGLTSDTAKDLEWFIPRKQINIEGLLD
SMITRPANAFEEPVNIQYKLLRNKLKQLATLEKEPWDSLRAAEKLYKQGASAPVVASVKH
RLHLLGDLLADDTTALFTPALDSAIRNFQDRTGLKTDGTIQLPLLRALNVTPKQRITQIL
INMERLRWVPASPPSTYLLVNIPAFKLYVYDSSKLDWSCNVVVGKPGANTVIFSNEVKYV
VFAPYWNVPPGILQKEVLPAMRRNSGYLARNHMEVVTGNGKPVSAGSINWAKASASNFPY
IIRQLPGGSNSLGKVKFLFPNEYNIYLHDTPSKGLFGENKRTFSHGCIRVSEPQHLAEWL
LRKDSSWTKSKIVDAMNAGKEKFVTLKQRVPVFIGYFTAFVDSEGRLNFRDDVYGHDAKL
ATTLFGTKADL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgttcccctatttctgcttgcattggcagctgtcttcgcatcctgtaatcac
gaaggtaaacgtaaacgacagcgcgtaagagataccagtcactatacccagaaggactat
attgacctgacgcttgatagtaatgctgtaaatacttttttacaacatgattccagcaat
gcttcttatatccgtagcttctacagacaacgtaactatcactttgcctggataggtaat
gatggacaactgaccgaacaggcaggaaactttatcaacctgatgaaatctgatgctgct
tttggtttgaatgatactagtattatcagccgtccgctgcgtgagatgtacgataccctc
atgatggaaggaggtaaactgaaacctgacgataaatctgttcctcagattgaactgtcg
ctcactgcccagttttttgcttatggcaataaagtatggggtggtctgacttctgatact
gccaaagacttagaatggttcattcctcgcaaacagattaatatagaaggcttgctggac
tctatgatcacccgtcctgcaaatgcatttgaagaacctgtaaacatacaatataaactg
ttgcgcaataaactcaaacaactggctacactggaaaaagagccatgggattccctgcgt
gcagcagaaaaattatataaacaaggagcctctgcaccagtggttgcaagtgtaaaacat
cgtttgcatctgttaggcgatctgttggcagatgatactactgctttgtttacaccagca
ttggattcagctatccgcaacttccaggatagaaccggactgaaaacggatggtactatt
cagttgcctctgctgcgtgcactgaatgtaacacctaaacaacgtattacacaaatcctg
atcaacatggagcgtctgcgttgggtgcctgcttcaccaccatctacttatttgttggta
aatattcctgcatttaaactgtatgtatacgatagcagtaaactggattggagttgcaat
gtagtagtaggaaaaccaggtgcgaataccgttatcttcagcaatgaagtaaagtatgta
gtgtttgccccatattggaatgtaccgcctggtatcctgcaaaaagaagtgctacctgcc
atgcgtcgcaacagtggctatctggccagaaaccatatggaagtagtgactggaaatggc
aaacctgtaagtgcaggatctattaattgggctaaagcttctgcttctaatttcccatat
attattcgtcagttaccgggtggatccaattctttgggtaaggtgaaatttctcttcccg
aatgagtataatatctatctgcacgatacgccatccaaaggtttatttggtgagaacaaa
cgtactttcagccatggctgtatcagggtttccgaacctcagcacctggcagaatggttg
ctgcgcaaagattccagctggacgaagtcaaagattgtagatgcgatgaatgcgggtaag
gagaagtttgtaacgctgaaacaacgggtgccggtgtttatcggatatttcactgcgttt
gtggatagtgagggcagattgaatttcagagatgatgtatatggccatgatgcgaaactg
gctaccaccttatttggaacaaaggctgacttataa
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