Chitinophaga sancti: SIO70_06130
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Entry
SIO70_06130 CDS
T09582
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csac
Chitinophaga sancti
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csac03032
]
SIO70_06130
03400 DNA repair and recombination proteins [BR:
csac03400
]
SIO70_06130
Enzymes [BR:
csac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SIO70_06130
DNA replication proteins [BR:
csac03032
]
Prokaryotic type
DNA Topoisomerases
SIO70_06130
DNA repair and recombination proteins [BR:
csac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SIO70_06130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WPQ64445
LinkDB
All DBs
Position
1460144..1461193
Genome browser
AA seq
349 aa
AA seq
DB search
MDVVAEAMATARAVKLRYVRSGTAGYSRVKTRSGFYYQDQHGEKITDEDTLHRIRGLVIP
PAWQEVWISPYPNGHLQATGIDAMGRRQYRYHSTWAKVRNETKYDRLLHFGEKLPQLRRN
IDEALKKKTLDKGKVIAIALSVMQETLIRVGNVAYEKLYGSYGLTTLRDQHVKISDGTAF
FKFKGKKGVIHQITLKHRQLARLLQKVRDIPGQELFQYYEAGDHKSLDSGDINEYLKLWT
GEDFTCKDFRTWSGTLHALNLLADLTPFESQHECKQNLVGIIDSVAGKLGNTMAVCKKYY
IHPRLVEAYEQCKLGPYLDALKAGREKVPKGGLHNDERVLLKFMKDGRS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggatgtagtagccgaagcaatggccaccgcaagggcagtgaaattgagatatgtaaga
tctggtaccgcgggttattcccgtgtaaaaacaagaagtggtttttactaccaggatcag
catggtgagaagattactgatgaggatacattgcatcgcatcaggggattagtaattcca
cccgcctggcaggaagtatggatttctccttatccaaatggtcacctgcaggctactggc
atcgatgccatgggcagaagacaataccgctatcattctacctgggccaaggtgcgcaac
gaaaccaaatacgaccgcctgctacattttggggagaaactaccgcaattgcgccgcaat
atagatgaggcactgaaaaagaaaacactcgataagggaaaagtgatcgccattgcactc
agtgttatgcaggaaaccctgatccgcgtaggcaatgtagcttatgaaaaactgtatggc
tcctatggcctgaccacattgcgtgatcagcatgtgaaaataagtgatggaacggctttc
ttcaagtttaaaggcaaaaaaggagtaatacaccagatcacacttaagcatcgccaactt
gccagattgctgcagaaagtaagagatattcccggtcaggaattgtttcaatactatgaa
gcaggagatcataaatcactcgactccggcgatattaatgaatacctgaaactctggaca
ggagaagactttacctgcaaggattttcgtacctggtcaggtaccctgcatgcattaaac
ctgttggcagatctgacgccttttgagtcgcaacatgagtgcaaacaaaacctggtaggt
attatcgatagcgtagcgggaaaactgggcaataccatggccgtgtgtaagaaatattac
atccatccccgtcttgtagaagcatatgaacaatgtaagctcggtccgtatctggatgca
ttgaaagccggaagggaaaaggttcctaaaggtgggttacacaatgatgagagggtgctg
ttgaaatttatgaaagacggacgatcgtaa
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