Chitinophaga sancti: SIO70_11145
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Entry
SIO70_11145 CDS
T09582
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csac
Chitinophaga sancti
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csac03032
]
SIO70_11145 (topA)
03400 DNA repair and recombination proteins [BR:
csac03400
]
SIO70_11145 (topA)
Enzymes [BR:
csac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SIO70_11145 (topA)
DNA replication proteins [BR:
csac03032
]
Prokaryotic type
DNA Topoisomerases
SIO70_11145 (topA)
DNA repair and recombination proteins [BR:
csac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SIO70_11145 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
WPQ65402
LinkDB
All DBs
Position
complement(2664319..2666673)
Genome browser
AA seq
784 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKILGSDFEVISCFGHIRDLEKDDMGIDINNNFKPKYIIPDDK
EKVVKDLKKLAKTTEEVWLATDEDREGEAISWHLCEVLGLDPEVTKRIVFHEITKPAIEK
AVQQPRLLNMNLVNAQQARRILDRIVGFELSPVLWRKMSMRNHLSAGRVQSVAVRLIVER
EREINGFTAVSSFKVEAFFISKDLNGKNITFKAEGPTRFKTAEDAEKFLQQCVGAAYTVK
DIQVKPGKKSPAAPFTTSTLQQEASRKLGYSVSKTMLLAQKLYESGKITYMRTDSVNLSD
TALGDIQKAITTNYGERYHQHRKFKNKNESAQEAHEAIRPTYMENASVDDSDTRKLYELI
WKRTIASQMSDAELEKTIAKIDISTNHDELTASGEVLKFDGFLKVYMEGRDDEDVSEDEE
QDGSLPPLALKQVLDLKEMKATERFTRPAPRYTEASLVKKLEELGIGRPSTYAPTITTIQ
KRNYVEKRDKEGVKRDFRILTLKDDKLTKVTDAENTGAEKSKLFPTDLGMIVTDFLSQYF
GNVMDYGFTAKIEEEFDEVAHGKKIWNKMLNEFYTPFHKDVENTLENAERVKGERQLGTE
ESTGKPIVARMGRYGPMVQIGKAEDEEKPRFAKLKATQSIETITLDEAMELFKLPRNLGK
FEEEDVTVNIGRFGPYAAHDKKFYSLKKEMDPYTVELDEIAPLIVEKRTAKDERTIKVFE
KEKIQILKGPYGPYIKQGLRNYKIPKEKIDTAADITVEEAKAIIEDVKANPPKKKAPPRK
KKAE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatctagtaattgttgagtctccggccaaagccaagacgattgaaaaaata
ctgggcagcgacttcgaggtcatatcctgctttggtcacatccgtgaccttgagaaggat
gatatgggcattgatatcaacaataacttcaaacctaagtatataatccccgatgacaaa
gaaaaggtagtgaaggacctgaagaagctggccaagacaaccgaagaggtttggttagca
acggatgaggaccgtgagggggaggccatcagctggcatttatgtgaagtactggggtta
gacccggaagttacaaaacgtattgttttccacgagattacgaagcccgccattgaaaaa
gccgtgcaacagccccgcctactcaacatgaacctggtaaatgcgcaacaagccagacgt
atcctggataggatcgtaggttttgagctgtcaccggtgctctggcgtaaaatgagtatg
cgtaaccacctctctgcaggtcgcgtgcaatccgtagcggtaagactgatcgtggaaagg
gaaagagaaatcaacggctttactgctgtaagcagctttaaagtagaagctttcttcatt
tctaaagacctgaatggtaagaacattaccttcaaggccgaaggacctacccggttcaaa
accgcagaagatgcggagaaattcctacagcaatgtgtcggtgctgcttacaccgtaaaa
gatattcaggtaaaacccggcaaaaaatctcctgccgctccctttaccacttctaccctt
cagcaggaagccagccgtaaactcggctatagcgtgtctaaaaccatgctgctggcacaa
aaactgtatgaaagtggtaagatcacctacatgcgtactgactcagtcaacctgtcagat
accgctttgggggatatccagaaagcaattacaactaactacggggagcgctaccaccag
caccgcaagttcaaaaataagaacgagtctgcccaggaagcgcacgaagccatccgcccg
acctacatggagaatgcttctgtagacgacagcgatacccgcaaactgtatgagctgatc
tggaagcgtactatcgccagccagatgagcgatgctgaactcgaaaaaacaatcgccaaa
atcgatatctctaccaaccacgatgagctgactgccagcggtgaagtactgaaattcgat
ggcttcctgaaagtatatatggaaggccgcgatgatgaagatgtaagtgaagatgaggaa
caggatggttccctgccaccactcgcgctgaaacaggtactggacctgaaggaaatgaaa
gcgaccgaacgctttacccgccctgctccccgctatacggaagcaagcctggtaaagaaa
ctggaagaactgggcataggccgaccttctacctacgcgccaaccattaccaccatccag
aagcgtaactatgtggaaaaacgtgataaagaaggtgtgaaaagagacttccgcattctg
acgctgaaagatgacaaactcactaaagtaacagacgctgaaaataccggtgctgaaaag
tccaaactgttcccgacagatctgggcatgatcgtaaccgacttcctgagccaatacttc
ggaaatgtaatggactacggcttcaccgccaagatcgaagaagagtttgacgaggtggca
catggtaagaagatctggaacaaaatgctgaatgagttctatactcctttccacaaggat
gtggaaaacaccctggaaaatgctgaaagggtgaaaggagaaagacaactgggtaccgaa
gaatctaccggcaaacctatcgtagcacgtatggggcgttatggcccaatggtgcagatc
ggaaaggcagaagatgaggagaaaccacgctttgcaaaattaaaggcaacacaaagcatc
gaaaccattactttagatgaggcaatggagctgttcaaacttccccgcaatttgggtaaa
tttgaagaagaagatgtaacagtgaacataggccggttcggtccatatgcagcacacgat
aagaaattctattccctgaaaaaggaaatggatccttacacagtggaactcgatgaaata
gccccgctgatcgtagaaaaacgtactgcaaaagatgaacgtaccatcaaagtatttgaa
aaagaaaaaatccagatactcaaaggcccctatggtccgtatattaagcaaggcttaagg
aactacaaaataccaaaggagaagatcgataccgctgcggatattacggtggaggaagca
aaagctatcatcgaagatgtgaaagccaaccctcctaagaaaaaagcacctcctagaaag
aaaaaagccgaataa
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