Chitinophaga sancti: SIO70_12305
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Entry
SIO70_12305 CDS
T09582
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
csac
Chitinophaga sancti
Pathway
csac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SIO70_12305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csac03021
]
SIO70_12305
Transcription machinery [BR:
csac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SIO70_12305
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
DUF722
HTH_24
HTH_23
MqsA_antitoxin
HTH_3
RPA_C
HTH_19
HTH_68
HTH_31
DUF7371
Xre-like-HTH
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
WPQ65632
LinkDB
All DBs
Position
2951422..2952015
Genome browser
AA seq
197 aa
AA seq
DB search
MESKINNDQILATRLKNGDHSAFEDLYATYHQLLYSVAFKYLKSAAAAEDAVHETFVRLW
THRDALDPLQGVRNYLFKTLKFYILNLIRNNKRMLVKNYEITYNAGEIHQETESSVIFND
YKKAVDTAINSLSAQKKHIFKMRSEQGLTNEEVAQRLGLSINTVKFQYSQASKTLKSVLK
LLFLLSVIVYKLFFSWT
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaaaaatcaacaacgatcaaattctggccacgcgtctgaagaacggcgatcac
tccgcatttgaggacttgtatgctacttatcaccagttactgtacagtgtagcattcaaa
tacctgaaaagcgcagcggctgctgaagatgctgtgcacgaaacgttcgtcagactgtgg
acacacagagacgcactcgatccgttgcagggggtacgcaactacctgttcaaaaccctc
aaattctatattctgaacctcatcaggaataacaagcgcatgcttgtcaaaaactatgaa
atcacctacaatgcaggcgaaattcaccaggaaaccgaatcttctgtcatattcaacgat
tataaaaaagcggtggatactgctatcaacagcctgtctgcccaaaagaaacatatcttt
aaaatgagatccgagcaggggctcaccaatgaagaagttgcccagcgcttaggattgagt
atcaatacagtaaagttccaatattcacaggccagcaagaccctgaagtcagttttaaaa
cttctttttctcctctctgtaatcgtttacaaactttttttttcctggacataa
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