Chitinophaga sancti: SIO70_15075
Help
Entry
SIO70_15075 CDS
T09582
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
csac
Chitinophaga sancti
Pathway
csac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SIO70_15075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csac03021
]
SIO70_15075
Transcription machinery [BR:
csac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SIO70_15075
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_40
HTH_23
HTH_24
HTH_10
UPF0122
HTH_28
PF0610-like_N
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WPQ66181
LinkDB
All DBs
Position
3622835..3623431
Genome browser
AA seq
198 aa
AA seq
DB search
MGKKNLQYESDEYLLDLIRLNNDHAAFSMLYERYWNKLLAISFNLTNDKSVSKEIVQEIF
ISLWNRRNSLEIKNLNNYLATAVKFSFFDFIEKERRRRVLASAKFGEREEAELDLGIEAL
FMKEYLTSLLTSLPEKCRLIVTYSRIHDMSNSAIAEKLNISEKTVEGHLTKGLKLLRSNF
KNRKSLAVLPILLYLHSL
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaagaatcttcaatatgagtccgatgaatacttgcttgatttaatcagactt
aataacgatcatgctgcattttctatgttatatgaacgatattggaataaactcctggcc
atttcattcaatctcacaaatgataaaagtgtctcaaaggaaattgtccaggaaattttt
atcagcctatggaatcgcagaaattcactggaaattaaaaatttaaacaattatttagcc
acagcagtgaaattttctttctttgacttcattgaaaaagaaagaagacgacgtgtattg
gcatcagcaaaatttggagaaagagaagaagcagaattagatttaggaatcgaggcactt
tttatgaaggaatatcttaccagccttttgacttccctacctgaaaaatgcaggcttatc
gtaacttatagccgtattcatgacatgagcaattcggcgatagcagaaaaattgaacatt
tctgaaaagacggtagaaggccatctcactaaaggactaaaactgctaagatcgaatttt
aaaaatcgcaaatcactggcagttttgcctattcttctttacctgcattctttgtag
DBGET
integrated database retrieval system
