Chitinophaga sancti: SIO70_15250
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Entry
SIO70_15250 CDS
T09582
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
csac
Chitinophaga sancti
Pathway
csac00550
Peptidoglycan biosynthesis
csac01100
Metabolic pathways
csac01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SIO70_15250 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SIO70_15250 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csac01011
]
SIO70_15250 (mrdA)
Enzymes [BR:
csac01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SIO70_15250 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
csac01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SIO70_15250 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WPQ66215
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Position
3671797..3673752
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AA seq
651 aa
AA seq
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MSIYNQPRRRVIQFIFIGLVLLIVSRLFILQIIDKKYSKLADANSVVRKVVYPSRGIIFD
RKGRSVLRNDVMYDLMVTPSNVKKIDTAYLCKILGIDMPEFKKRIVAAIVRNGRVRQSVF
APLLLPDVYGQLQESMYQFQPGFELMPRQIRSYPYSGAANILGYIGEISPQMQLNPAYKD
YNMGDYLGMTGLEKTYEHILMGQRGIQYLVKDNLNRTQGAYEKGEFDTAAIAGKNLRLSL
DIDLQVLGERLMHNKIGSIVAIDPQTGGILAMVSGPSFDPNLLTGSYRARNFNKLFSDTT
KPLFNRAIQGTYAPGSSMKPLTALVALDEGIITPDFGYPCHGAYLSCGRRIACEHSEAGH
AANLRLAISHSCNSYFVNLYRMEVDAKKWGGVEKGHQKWYEYMTSFGLGHRLGIDIPGEY
AGYAIDTVGMNKRYHGQWNSCSELYVGMGQGAVAVTPLQMANAMCIIANKGFYYLPHFVN
SIDNDVSDVLKKFRDKHTVAHVKDTAYQSVILGMEDVVESGTGRNAQIEGVIVCGKTGTA
ENNGIVNGQLKKMKSHAFFVAFAPRDHPKIAVAVIVENSGYGGTFAAPIAGLMMEKYLND
TISVKKKPVVQKMLETVTMDPVVLTKSKLDSLNGATAHLTTEQIMKEYFRN
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtccatttataaccagccgagaaggcgtgtcatccagtttatttttatcggtctcgta
ctgctgattgtttcccgtttatttatactgcaaataattgataagaaatattccaagctg
gcagatgccaactccgtagtgagaaaagtcgtctatcccagccgtggaatcatctttgac
agaaaggggagaagtgtgttgcgcaacgatgtgatgtacgacctgatggtcactccatcg
aatgtaaagaaaattgacacggcttacctgtgtaagatcttagggattgatatgccagag
tttaagaaacgcatcgtggcggcaattgtcaggaatggccgggtaagacagtcggttttt
gcaccgttgttattgccggatgtatatgggcagttgcaggaaagtatgtaccagtttcaa
ccgggttttgagctgatgcccaggcagatccgttcttatccttatagtggtgctgccaat
atattgggctacataggtgagatctcgccacaaatgcagttgaaccctgcttataaagat
tataacatgggtgactatctggggatgacaggattggagaaaacctatgagcacattctg
atggggcaaagagggattcaataccttgtgaaggataacctgaatcgcacacagggggcg
tatgagaaaggtgaatttgacactgcggcaatagcgggcaagaacctccgtctatcattg
gatattgatttgcaggtattgggtgagcggttgatgcataacaagataggtagtattgtc
gccatcgatccgcaaacaggtggtatattggcaatggtaagtggtccttcatttgatcct
aacttattgacggggtcttacagggcacgcaattttaataaactatttagtgatacgacc
aagccattgtttaacagggctattcagggtacgtacgcaccgggtagctccatgaaacca
ttgacagcgttggtagcgctggatgaaggtatcattactcctgattttggttatccctgt
catggtgcttatttgtcctgcgggcgaagaattgcctgtgagcatagtgaagcaggccat
gcagcaaatttgcgactggctatttcgcactcctgcaattcttactttgtgaacctgtac
aggatggaagtggatgcaaagaaatggggtggggtagaaaaggggcatcagaagtggtat
gaatacatgacgtcatttggcttgggacaccggttaggcattgatataccgggagaatat
gcggggtatgcgattgataccgtgggcatgaataagcggtatcatgggcagtggaattcc
tgttcagagttgtatgtaggaatgggacagggcgcagtggcggtcacgcctttgcagatg
gcgaatgcgatgtgtatcattgcaaataaaggattttactacctgccgcattttgtgaat
agtattgataatgatgtttctgatgtgctgaagaagttcagggataaacatacggtagcg
catgtaaaagatacggcttaccagtcggtgatattgggaatggaagatgtggtggaaagt
ggtacgggtagaaatgcacagatagaaggggtgatcgtgtgtggaaagacaggtacggca
gagaacaatggcatcgtaaacgggcaattgaagaagatgaagagccatgcattctttgtg
gcttttgcaccgagagatcatccgaagatagcggtggcggtcattgtggagaattctggt
tatgggggcacctttgcggcgccgattgcaggattgatgatggagaagtatctgaatgat
acgatttcagtaaagaagaagccggtggtgcaaaagatgctggagacggtgacgatggat
ccggtagtgcttacaaagtccaagctggattcattgaatggcgcgacggctcatctcacg
acagagcagattatgaaagagtatttcaggaattaa
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