Chitinophaga sancti: SIO70_16425
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Entry
SIO70_16425 CDS
T09582
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
csac
Chitinophaga sancti
Pathway
csac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SIO70_16425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csac03021
]
SIO70_16425
Transcription machinery [BR:
csac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SIO70_16425
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_7
HU-CCDC81_euk_2
HTH_24
HTH_23
DUF6362
HTH_Mga
DUF8612
DUF2774
HTH_28
HTH_26
DUF1670
HTH_11
HTH_40
DUF1441
HTH_3
dnstrm_HI1420
CSTF_C
GerE
Mac
HTH_IclR
Crp
Motif
Other DBs
NCBI-ProteinID:
WPQ66446
LinkDB
All DBs
Position
complement(3977243..3977839)
Genome browser
AA seq
198 aa
AA seq
DB search
MFADVTDNNTELLSLVAAGNEKAYRKLFHLYADLLHTYIQHLTKSNELAEEIVQDIFLQI
WTTRETLGNIHNFRNYLFVISRNHALNIIKKMVRENKKRKLWEYNEELLATHPPENQERQ
LSLIEEAIAQLPPQQQKVWIMSRQQGMKYNEIATATGLSRETVKKYLQYGTQSIINYVTK
HKDLLLILLLFIKKKFPT
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
ttgtttgcagacgttacagataataacacagagctcctttcacttgtagctgcgggcaat
gaaaaagcttaccgaaagctctttcacctctatgctgatctgttacatacatatatacaa
catctcacaaagtcaaacgaactagccgaagaaatcgtacaggatattttcctgcaaatc
tggacaacacgggaaactttgggcaatattcacaacttcaggaactacctctttgtcatc
tcccgtaaccatgcgctgaacatcataaaaaagatggttcgcgagaataaaaaaagaaag
ctatgggaatataatgaagaactcctcgccacccatcctccagaaaatcaggaacgtcag
ttaagtcttatagaagaagcaattgcccaactccctccccagcaacaaaaagtatggatc
atgagccggcagcagggaatgaaatataatgagattgcgactgcaaccggcctttccagg
gagactgtgaaaaaataccttcaatatggtacccaatcaattataaactatgtaaccaaa
cataaagaccttttattgatcttacttttatttattaaaaaaaaattccccacctga
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