Chitinophaga sancti: SIO70_16900
Help
Entry
SIO70_16900 CDS
T09582
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
csac
Chitinophaga sancti
Pathway
csac03030
DNA replication
csac03430
Mismatch repair
csac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SIO70_16900
03430 Mismatch repair
SIO70_16900
03440 Homologous recombination
SIO70_16900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csac03032
]
SIO70_16900
03400 DNA repair and recombination proteins [BR:
csac03400
]
SIO70_16900
Enzymes [BR:
csac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SIO70_16900
DNA replication proteins [BR:
csac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SIO70_16900
DNA repair and recombination proteins [BR:
csac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SIO70_16900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DUF7508
GIY_YIG_2
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WPQ66540
LinkDB
All DBs
Position
4125504..4126874
Genome browser
AA seq
456 aa
AA seq
DB search
MYAIVDIETTGGHASANGITEIAIFIYDGSQIVQQYESLINPGVPIPRYIQSLTGITDQM
VATAPKFADVAGEVFALLKDKIFVAHNVNFDYSFLQYHLLQAGYDLRTKKLCTVRLGRKI
VPGLPSYSLGNLCRSLQINVEQRHRAAGDAAATVRLMGLYLSLDTNNAISAALKTTSKEQ
FLPPHLPPDQVKKLPASPGVYYFHDQKGKVIYVGKAKDIKKRVNSHFTGNNPSRQRQEFL
RNIYSVSHEVTGTELMANILESIEIKRLWPKYNRSQKNVEFKYGFYTFEDQLGYLRLVIE
RRRKYTRPLHSFPLLVQGHTMLKGLIREFDLCPRLCFLQKGDGACKPLTGHKCKGACDKK
EGPEYYNLRVQAAIIHMQMQQPSFIIVDTGRDAGEQSYILMEKGKFYGMGYIPRDTAITM
EEDVKDRLTQYPENEYILNLIHQFAGANNSRLLKFS
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaattgttgatatcgaaaccacaggtgggcacgccagtgccaatggcatcacc
gaaatagccatttttatttatgatggatctcaaattgttcagcaatacgaatcgctgatc
aatcccggcgtacctattccccgttacatccagtcgcttaccggcattactgaccagatg
gtagccactgctcccaaatttgcagatgttgcaggcgaagtatttgccttgctaaaagac
aagatcttcgtcgctcacaacgtcaacttcgactattcatttttacaatatcatttgctg
caggcaggttacgacctccgcaccaaaaaactgtgtaccgtacgcctgggtcgtaaaatc
gttcccggtttacccagttacagtctcggtaacctttgccgctctctgcaaatcaatgta
gaacagcgtcaccgtgctgccggcgatgctgctgccaccgttcgtcttatgggcctctac
ctgagccttgatacgaacaacgctatctcagctgcactcaaaaccaccagcaaggaacag
ttcctgccaccgcaccttcctcctgaccaggtaaagaaattacctgcctccccgggtgta
tattatttccatgatcagaaagggaaggttatctatgtcggcaaagccaaggacataaaa
aagcgtgtcaatagccattttaccggcaataatcccagccgccagcggcaggagtttttg
cgcaacatctatagtgtctctcacgaagtgacaggtacggaactgatggccaatattctc
gaaagcattgagatcaaacggctgtggccaaaatataacaggagtcagaagaacgtagaa
ttcaaatacggcttctacacttttgaagaccagctgggctacctgcgcctcgtgatcgaa
cgccgccgcaagtatacccggccacttcactcattccctttactggtacaaggccatacc
atgcttaaagggctgatccgtgaattcgatctctgcccccgtctctgcttcctgcagaaa
ggcgatggcgcctgcaaaccgttgacaggccacaagtgtaaaggtgcctgcgataagaag
gaaggaccggaatactataacctccgggtacaagccgccatcatccacatgcaaatgcag
cagccgagctttatcatcgtcgataccgggcgcgatgcaggtgaacagagctatattctg
atggaaaaagggaagttctacggcatgggctacatcccccgcgatactgccatcacaatg
gaagaagacgtgaaggaccggcttactcagtaccctgagaatgaatacattttaaacctg
atccaccagtttgccggtgcgaataattcccggcttttaaagttttcttag
DBGET
integrated database retrieval system
