Chitinophaga sancti: SIO70_17680
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Entry
SIO70_17680 CDS
T09582
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
csac
Chitinophaga sancti
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csac03009
]
SIO70_17680 (rimO)
Enzymes [BR:
csac01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SIO70_17680 (rimO)
Ribosome biogenesis [BR:
csac03009
]
Prokaryotic type
ribosomal protein modification factors
SIO70_17680 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Oxidored_nitro
Motif
Other DBs
NCBI-ProteinID:
WPQ60175
LinkDB
All DBs
Position
4317594..4318901
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AA seq
435 aa
AA seq
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MKTKTLKKDKVNIITLGCSKNMVDSEVLSGQLLANEIDVVHESAKKDHNIVVVNTCGFID
KAKEESINTILEQVELKQDGRLDKVYVTGCLSERYRGDLESEIPGVDAWFGTMELPLILK
KFDADYKAELLGERLLSTPTHYAYLKIAEGCNRTCSFCAIPLMRGGHVSKPMEAIITEAE
KLVNSGVKEIMLIAQELTYYGLDLYKQRKLADLLRALANVKGLEWIRLHYAYPHKFPMEV
LDVMKEFPNICNYIDMPLQHAADNMLKSMKRQITRVEMEELVTAIREKVPGIALRTTLIT
GYPGETLEDVEELKAFLEKMRFDRVGVFTYSHEEGTSAYDLEDNIPAEEKERRAQEIMEV
QQEISLEKNQEMVGKIYRVIVDKRESGRYLARTEFDSVEVDNEVIINTTRRLKPGEFVNV
RITKAYDYDLEGELV
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
ttgaagacaaaaactttaaagaaagataaggtcaatattattacgcttggatgttccaag
aacatggtagattctgaggtactcagcggacagttgcttgccaatgaaattgatgtggta
cacgagagtgctaaaaaagatcataatatcgtagtggtgaacacctgcggttttatcgat
aaagcaaaagaggaatccatcaataccatccttgaacaggtagaactgaaacaagacggt
cgtctcgacaaggtctatgtgaccggttgtctcagtgaacgctatcgtggggatcttgaa
tcagaaattccgggtgtggatgcctggtttggtaccatggagctgccgctcatcctcaag
aaatttgacgctgattataaagcagaactgctcggcgaaagattgttgagtacacctaca
cattatgcctatctgaaaattgcagaaggttgtaaccgcacctgctcattctgtgcgatt
cctttaatgcgcggcggacacgtatccaagcccatggaagcgatcattacagaagcagag
aaactggtgaactccggtgtgaaagagatcatgctcattgcgcaggaactgacttattat
ggtctggatctgtataagcagcgtaaactggcagatttattgcgcgctttggcaaacgtg
aaaggattggagtggatccgcctgcattatgcttacccgcacaaatttccaatggaagta
ttggatgtaatgaaggagttcccgaacatctgtaattacatcgatatgccgcttcaacat
gctgcagacaatatgctgaaatccatgaaacgccagatcacccgggtggaaatggaagaa
ttggtaacagctatcagggaaaaagttcccggcattgcactccgtactacacttatcacc
ggctatcccggtgaaacgctggaagatgtggaagaactcaaagcctttctcgaaaagatg
cgtttcgacagggtaggggtctttacctacagccatgaagaaggtaccagtgcttatgac
ctggaagataatatcccggcagaagaaaaagaacgcagagcacaggagatcatggaagta
caacaggaaatctctctcgaaaaaaatcaggagatggttggaaagatctaccgcgtgatc
gtcgacaaaagagaatcaggccgttatctggcacgtactgaattcgattcggtagaagta
gataatgaagtaattataaacacaaccaggcgcctgaaacccggggaatttgtcaatgta
agaattacgaaagcttacgattatgacctggaaggtgagcttgtataa
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