Chitinophaga sancti: SIO70_17935
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Entry
SIO70_17935 CDS
T09582
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
csac
Chitinophaga sancti
Pathway
csac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SIO70_17935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csac03021
]
SIO70_17935
Transcription machinery [BR:
csac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SIO70_17935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
HTH_40
PF0610-like_N
UPF0122
HTH_5
DUF3942
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
WPQ60226
LinkDB
All DBs
Position
4386890..4387468
Genome browser
AA seq
192 aa
AA seq
DB search
MNLHLLTDDLLLRLLQASDENAFRVLYQRYWKKLFTTACYKLKSKEAAEEIVQNIFVSLW
EKRATLQIESLENYLFIAVKYKVINYVESLMVRQAGQKQLAGNTTDESTEATIMINDLHA
AIQQALTQLPAKTREVFTMSRFEKYSVREIARHMNLTEKAVEYHITQSLKLMRVSLKDYM
VIGVPLIVTLLK
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcatttgctgactgatgatctcttgctccggctattgcaggcttccgacgag
aatgcattccgggtactataccagcgttattggaagaaactattcaccacggcctgttac
aaattgaaaagtaaagaagctgcggaggagattgtacaaaatatttttgtcagtctgtgg
gagaagagagccaccttacaaatcgaaagtcttgaaaattatttatttatagcagtaaaa
tataaggtcattaattatgtggagtctttaatggtaagacaggccggtcaaaagcaactg
gcagggaataccacggatgaatctacagaggcgacgatcatgatcaatgacctgcatgct
gctatccagcaggcattgacacagttaccggctaagacgagagaggtgtttacgatgagt
cgttttgaaaaatattcagtgcgggagattgcgcggcatatgaacctgacggagaaggca
gtggagtatcatataacacaaagcctgaaattaatgagagtgagtttgaaggattatatg
gtgataggggtgccattaatagttacattattaaaatga
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