Chitinophaga sancti: SIO70_17955
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Entry
SIO70_17955 CDS
T09582
Name
(GenBank) PAS domain S-box protein
Organism
csac
Chitinophaga sancti
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
PAS_4
HATPase_c
PAS_3
HisKA
PAS_9
PAS
PAS_8
Hpt
PAS_11
GAF_2
Motif
Other DBs
NCBI-ProteinID:
WPQ60230
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Position
4394693..4398568
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AA seq
1291 aa
AA seq
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MKATSNTQREAERLNTLAGYHILDSHPEEEFDRLTTLAALICNTSTACISFPDQDRQWLK
SAIGLNFREVTREWSFTEEVLRTNSYVEKPDIGEGNFFRFFSGYPIRDPKGIILGALCVM
DEQPRQLQESQRHALELMANEIMTLILNRRQKEEVYYLEKLFLLSDNLVGITTSSGKFKK
VNLAYTHIFGYSPEEMLQQNILDMIHPDDLPASLAESSNTIAGKSAIAFENRLRTKSGEW
RTISWMATAEPDTQDIFSIGHDITEERRKEQLLRESERNFRTFFENSPELMCTHDLKGYF
LTVNEAGAAGLGYTLDELVGASLFDIAPKELHHEVHAYLDQIKKSGKLNGLMKVLKKDGT
RIIIHYNNVLVDHYVISNAADITIHYQLEKDLKRSTEMLERTNKVARIGAWEIDMHNGKV
FWSDVTREILEVTPDEPAQFSNGMRFYKEGENRQRMQAALAETIATGNSFNLELEIVTEK
GNDRWVRSRGSAQFENGQCKRLFGILQDITEMKLAEIELKTQKLRLSTFVEHAPAAVAMF
DKEMRYIAVSRRWLEEFRIQGQSVLGISHYEVFPNISDRWKEIHASAQSGEVLREEKDVW
RPEGWNHDQYLRWEVRPWFQYDGKIGGIMMFTQDITEAYLQQEEYKQAKILAEQANIAKS
EFLANMSHEIRTPLNGVIGFTDLVLKTHLTESQNQYLSIVNQSANALLSIINDILDFSKI
EAGKLELDINKCDLYEFCSQASDIISYQAQNKGLELLLNVSSNLPRFVYIDEVRLKQILV
NLMGNAVKFTPEGEIELKVTQLDRDDLFRFEVRDTGIGIRPEKAHKIFEAFLQEDVSTTK
KYGGTGLGLTISNKLLALMGSTLQLESEPGKGSRFFFDISVKTEDGERIHWENIDMVKNV
LIVDDNDNNRVILREMLFLKGISFVEAKNGFEALEILSKKNYIDVVLMDYHMPFMDGIET
IEKIRKNIDADPRQKIILLHSSSDDERIIKACERLQVQQRLVKPIKMQEMYNALSRLFKK
EMIIPVTTENTSQSARGEGFNVLVVEDNPINMFLATTIIHRIAPAAVIHEANNGKEALAI
LSHIMPDIILMDIQMPEMNGYEASKLIRTDYPGFRVPIIALTAGNIMGEREKCIEAGMDD
FMAKPFIENTMVAMFNKWLRLDNPQEPEELGDKAEVLDIEYLKTYLGDDDPAFMKDILSL
TVREFNKLMAEFDSVLTGENVLTLNAWGHKLRGVAVTVGLMDLALLAEQIEGLKNIQPEA
LQELVIEAKGKISKAIRLIQNCIDTALSLHS
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaaccagtaatacccagcgcgaagccgaaagattgaatacactggctggctat
cacattcttgactctcatcctgaagaggaattcgaccggcttaccaccctcgctgccctc
atctgcaatacctctacggcctgcatctccttccccgatcaggaccgccaatggcttaaa
tcagctatcggactaaatttcagagaagttacccgcgaatggtccttcacagaagaggtc
ctccgcaccaacagctatgtagaaaagcctgacattggcgaaggcaacttcttccgcttt
ttctccggctaccccattcgcgatcccaaaggcatcattctcggggctctttgtgtcatg
gacgaacaacctcgtcaattgcaggagagccagcgccatgcactggaactcatggcgaac
gaaattatgaccctcatcctgaaccgccgtcagaaagaagaggtctattatttagaaaaa
ctctttcttctctcggacaaccttgtaggtatcactacctcctccggtaagttcaaaaag
gtcaaccttgcctacacccacatcttcggttattcaccagaagaaatgctgcaacagaac
atcctggatatgatccatcccgatgacctgccagcctccctggccgaaagcagcaacacg
atcgccggtaaatctgctatcgctttcgagaaccgcctccgaaccaaatcaggtgaatgg
cgtaccatctcgtggatggccaccgccgaacccgacacccaggatatttttagcataggc
catgacatcaccgaagaacgcagaaaggaacagctgctcagggaaagtgaacgtaacttc
cgcactttcttcgaaaactcccccgaactcatgtgcacccatgatttgaagggctatttc
cttaccgtcaacgaagccggtgcagcaggattggggtataccctcgatgaactggtgggt
gccagtctgttcgatatcgcaccaaaggaactgcaccatgaggtgcatgcatacctggac
cagatcaaaaaatcaggcaaactaaacgggttgatgaaagtgctgaagaaagacggtaca
cgcattataattcattacaataacgtactggtagaccattacgtcatctctaacgcggcg
gacattactatccattaccagctggaaaaggacctgaagcgctccaccgaaatgctggaa
cgtacgaacaaagtagcacgtattggcgcctgggaaatagacatgcataatggaaaagtt
ttctggtctgacgtaacccgcgaaatactggaagtaaccccggatgaacctgcccagttt
tccaatggcatgcgtttttacaaagagggcgaaaaccgccagcgtatgcaggcagcactg
gcagagaccattgccacgggcaattctttcaacctggaacttgaaatcgtaaccgaaaaa
ggtaatgaccgatgggtacgcagccgcggcagtgcacagtttgaaaacggtcaatgcaag
cgactctttggcatcctgcaggacatcactgaaatgaaactcgcggagatagaactcaaa
acccagaaattgcggctctcaacctttgtggaacacgctccagcggcagtggccatgttc
gacaaggaaatgcggtacattgccgtgagtcgtcgctggctggaggaattccggatacag
gggcagtccgtactgggtatctctcactacgaggtattccccaatatatcagaccgctgg
aaagagatccatgccagtgcacagtcaggcgaagtactcagggaagaaaaggacgtatgg
cgccctgaaggctggaaccatgatcagtacctgcgttgggaagtaagaccctggtttcag
tacgatggcaaaattggcggtattatgatgttcacccaggatattaccgaagcttatctg
cagcaggaagaatataaacaggcaaaaatactggccgaacaggcgaatatagcaaagtca
gaatttctggcaaatatgagccatgaaatcaggactccgttaaatggcgttatcggcttc
acagaccttgttttaaagacgcaccttacggaatctcagaaccaatacttatcgatcgta
aatcagtctgcaaatgcccttttaagcattatcaatgatatcctcgacttctcgaagatc
gaggcgggcaaactggaactggatattaataaatgtgatctctatgaattctgtagtcag
gcgagtgatattatcagttaccaggcgcagaacaaagggttggagctgttactgaatgtc
tcctccaatctgccccgttttgtgtacatagatgaagtacgcctgaaacagatacttgtg
aacctgatggggaatgccgtgaaatttactcctgagggtgagatcgagctgaaagtgacg
caactggacagggatgaccttttccgttttgaagtacgcgatacgggtattggtatccgg
ccagagaaggcgcataagatatttgaagcgttcttacaggaagatgtgtccaccacaaaa
aaatatgggggtacggggttggggcttaccatctcgaacaagttactcgcattgatgggt
agtacccttcagctggaaagtgaaccaggtaaggggagccgtttcttctttgacatctct
gtaaaaacagaagatggtgaacgcattcactgggagaacatcgacatggtcaaaaatgta
ttgatcgtagatgacaatgacaacaaccgtgtgatcctgagagaaatgcttttcctgaaa
gggatcagttttgtagaagcaaaaaatggttttgaagcgctggagatcctctcaaagaaa
aattatatcgacgtagtgctcatggattatcacatgccttttatggatggaattgagacc
atagaaaagatcaggaaaaatatcgatgccgatccccggcagaaaataatcttactgcat
agttcctcggatgatgaaaggatcatcaaagcctgtgaacgcctgcaggtacaacagcgt
cttgtaaaacctattaaaatgcaggagatgtacaacgccctgtcccgtttattcaagaaa
gaaatgatcatacctgttacgactgaaaatacctcacagagtgcgaggggcgaaggtttt
aatgtgctcgtggtagaagataacccgatcaatatgtttctcgccacgactattattcat
cgcatcgcgcccgcagctgtgatccatgaagcaaataatggtaaagaagcattggcaatt
ttaagtcatatcatgccggatattattctcatggacatccagatgccggagatgaatggt
tatgaagccagcaaactgattcgcacggattatcctggttttagggtgcctattattgcg
ctgacagcaggcaatatcatgggtgagcgggagaaatgtatagaagcgggaatggacgat
tttatggcaaaaccatttatagaaaataccatggtggcgatgttcaataaatggttgcgg
ctggataatccacaggagccggaagagctgggagataaagcggaggtattagatattgaa
tatttgaaaacgtacctgggtgatgatgatccggcgtttatgaaagatatcctatcactg
acagtgagggaattcaataagctgatggcggagtttgacagtgttttgacaggcgaaaat
gtgcttactttaaatgcctgggggcataaattacgtggggtggcagtgacagtggggttg
atggatctggcattgctggcggagcagattgaaggtttgaaaaatatacagccggaggcc
ttacaggaattggtgatagaagccaaaggaaagatcagtaaggcgatccggctgatacaa
aattgtattgatacggcgcttagtctacactcgtaa
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