KEGG   Chitinophaga sancti: SIO70_19625
Entry
SIO70_19625       CDS       T09582                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
csac  Chitinophaga sancti
Pathway
csac02020  Two-component system
Brite
KEGG Orthology (KO) [BR:csac00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SIO70_19625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csac03021]
    SIO70_19625
Transcription machinery [BR:csac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SIO70_19625
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_ECF GerE Sigma70_r4 HTH_40 PhyR_sigma-like HTH_10 Kizuna_M HTH_23
Other DBs
NCBI-ProteinID: WPQ60563
LinkDB
Position
complement(4799793..4800341)
AA seq 182 aa
MQNFSDNELLTSMVTGDEAAFTEIYHRYWQRLLAIAWKHTHDESSAKEIVQEVLINLWDR
RASLEIGQLSNYLATAIKFSVFKHYHQQQRRKTILHSIFRTTHSADDEKIYARLLDDYIN
GIVEKLPEKCRQVYKLSRLEGKTNQQIASVMNISEKTAEAHLTKALRTIRLNLRHINMLF
FL
NT seq 549 nt   +upstreamnt  +downstreamnt
atgcaaaatttcagtgacaatgagctgctcacctccatggtaacaggggatgaagctgct
tttactgaaatttaccaccgctactggcagcgactccttgccattgcctggaagcatacc
catgacgaatcttctgccaaggagattgtacaggaagtgctgatcaacctatgggacagg
agggcttccctggaaatcggccagctctccaactacctggctacagctatcaagttttcc
gtatttaagcattaccaccagcaacaacgcaggaaaaccatcctccacagcattttccgt
actacccacagtgcggacgatgaaaagatctatgcccgtctgctggacgactatatcaat
gggattgttgagaaactgcccgaaaaatgcaggcaggtgtacaaactgagccggctggaa
gggaaaaccaaccagcagatcgccagtgttatgaatatctccgaaaagacagcagaagca
cacctcaccaaagccctgcgtaccattcgcctcaatctgcggcatatcaacatgctgttt
ttcctctaa

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