Chitinophaga sancti: SIO70_21180
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Entry
SIO70_21180 CDS
T09582
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
csac
Chitinophaga sancti
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csac01002
]
SIO70_21180
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
csac01011
]
SIO70_21180
Peptidases and inhibitors [BR:
csac01002
]
Cysteine peptidases
Family C82
SIO70_21180
Peptidoglycan biosynthesis and degradation proteins [BR:
csac01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SIO70_21180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
WPQ60873
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All DBs
Position
complement(5197179..5198807)
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AA seq
542 aa
AA seq
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MKKALIFSAFAISLIAGCKSDTKKTSGGDAAQHFEIPVTPRNNEITPANAYNGLFLETKD
VEKFITNQKLDSNLANRLRSFYNARNFEYAWFDTSGLNEQAYGFRSLYDYSVDTSENNKA
LEYRLNALMNNEPDSAVSATDANIVKTELQLTQRFINYFLDAHKDDKDAVIAMEHYVPMQ
KNEILKQADAVISGKGYHATDIHNVYGDLTKELEKYTAIAKKGNWDSIPVEKKKKYKKGD
NSPVIAAIKHRLQATGELDGKDTTGVYDDALEAAVNKFEGAHGHTPRGIITDTLIREMNV
PAITIVEKLLINMERMRWTPPVPEGRLIMVNIPEFMLHAWDGKNKDFDMAVVVGKEGKGT
TSFSGDLNQVVFSPYWNLPRSIIKEEVLPAMARNKSYLASHHMEVTGERNGVPVIRQVPG
KENPLGRVKFLFPNSFNIYFHDTNQKELFNKDQRAYSHGCIRLSDPVKMANYLLHDQPEW
TAEKIDSAMNSGKEKYVRVKNPVPVMISYYTTWVGADGQLHVVDDIYDHDRKIAAKLFTD
VH
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggcattgatattttcggctttcgcgatctctttgatcgcaggttgcaaatct
gatacgaaaaagacttccggcggcgatgccgcacagcattttgaaatacctgtcacccca
aggaacaacgaaattaccccggcaaacgcgtacaatggtcttttccttgaaaccaaagat
gttgagaagttcatcactaaccagaaactggatagtaaccttgctaacaggttgcgtagc
ttttacaacgcacgcaactttgaatacgcctggttcgataccagtggtctgaatgaacag
gcatatggattccgtagtttatacgattatagcgtagacaccagcgaaaacaataaagca
ctggaatatcgcctcaatgcccttatgaacaatgaaccggattcagctgtctctgccacc
gatgctaatattgtgaagacagagctacagctgacacaacgattcattaactacttcctc
gatgcacataaagatgataaagatgccgtgatagccatggaacactacgtgcccatgcaa
aagaacgagatcctgaaacaggcagatgctgtcatctcaggcaaagggtatcacgctacc
gatattcataatgtatatggtgatctgacaaaagaactggagaaatataccgctatcgca
aagaaaggtaactgggatagcattcctgtagaaaagaagaagaaatacaagaaaggagat
aacagccctgtcatagccgccatcaaacatcgcttgcaggcaaccggggaactggacggc
aaagacacgaccggtgtatatgacgatgcgctggaagctgctgtcaataaatttgaaggt
gcacatggtcacacaccaagaggaattatcacggatacccttatacgtgaaatgaatgta
ccggccattaccatcgtcgaaaaactactgatcaatatggagcgtatgcgttggacacca
cctgtacccgaaggtagactcatcatggtgaatattcccgaattcatgctccatgcatgg
gacggcaagaataaagactttgacatggcagtcgtagtaggcaaggaaggtaaaggtacc
accagcttctccggcgatctgaaccaggttgtattcagtccttactggaacctgcccagg
agcattatcaaagaagaagtattacctgccatggccagaaataaaagttacctggccagc
catcatatggaagtgaccggcgaaagaaatggcgttccggtgatcaggcaggtacccggc
aaagaaaatccattgggcagggtaaaattcctgtttcccaacagcttcaatatatatttc
cacgatacgaatcaaaaggaattattcaacaaggatcagcgcgcatatagccatggctgt
ataaggctgtcagatcctgtaaaaatggccaattacctgctgcatgatcagccggaatgg
acagcagaaaagattgatagtgcaatgaacagtggaaaagaaaagtacgtcagagtgaag
aacccggtacccgttatgatttcctattatactacctgggtaggcgcagacggtcagttg
catgtggtagatgacatctatgaccatgaccgtaaaatagctgcgaaattatttactgac
gtgcattaa
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