Chitinophaga sancti: SIO70_21925
Help
Entry
SIO70_21925 CDS
T09582
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
csac
Chitinophaga sancti
Pathway
csac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SIO70_21925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csac03021
]
SIO70_21925
Transcription machinery [BR:
csac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SIO70_21925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
HTH_28
GerE
HTH_23
HTH_Tnp_ISL3
HTH_40
Bestrophin
HTH_11
DUF5677
DUF4322
HTH_AsnC-type
Mor
SpoIIID
HTH_29
HTH_10
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
WPQ61019
LinkDB
All DBs
Position
complement(5403121..5403735)
Genome browser
AA seq
204 aa
AA seq
DB search
MKNLTDAELLSLVQQENDEKAFAILVLRYNVALYKYIYARVRSEDDSKDILQEVLISCWN
NRYNIQNPEKIFNYLCRAAYYSVIDWQIAHKKILARQTILLEKDEPSTFPVENQLIAGEM
REKVDTEVAKMNDTMRKVFISSRWESKSIREIAQEYGLSEQTVKNTISLALKRIRLRLQT
DHWLSVYILLTLCSQFLNGTAYMI
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatttgaccgatgcggaattattatccttagttcagcaggagaatgatgagaaa
gcttttgccatacttgtattacgttacaatgtagcgttgtataagtatatctatgcccgc
gtgcgatcggaagatgactccaaagatatactgcaggaagtactgatctcctgctggaat
aaccggtacaacattcaaaaccccgaaaaaatcttcaactacttgtgccgtgccgcctac
tattctgtaatagactggcagatagcacataaaaaaatattagcgcggcaaactatctta
ttagaaaaagacgaacccagtactttccctgtcgagaaccagttgatagccggcgaaatg
cgggaaaaggtggatactgaagtcgcaaagatgaatgataccatgcggaaagtttttatt
tccagccgctgggaatccaagtctatccgcgaaatagcccaggaatacggactctcagag
caaaccgtaaagaataccatatcccttgccctcaaaaggatccgcctccgtttacaaaca
gaccattggctctccgtttacattctgttaacattgtgttcacaattccttaacggtacc
gcttatatgatttag
DBGET
integrated database retrieval system
