Chitinophaga sancti: SIO70_22275
Help
Entry
SIO70_22275 CDS
T09582
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
csac
Chitinophaga sancti
Pathway
csac02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SIO70_22275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csac03021
]
SIO70_22275
Transcription machinery [BR:
csac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SIO70_22275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
GerE
Sigma70_r4
HTH_24
HTH_Tnp_4
HTH_23
PF0610-like_N
HTH_Tnp_ISL3
HTH_11
HTH_40
Borrelia_orfD
Motif
Other DBs
NCBI-ProteinID:
WPQ61089
LinkDB
All DBs
Position
complement(5493837..5494376)
Genome browser
AA seq
179 aa
AA seq
DB search
MMRSNSENTAAIFDRIFKETWSGTVAYLIKISNNNELAEDLAQEAYLKAWQKFHLLPGEE
TEIARYILVIARNCFLDHLKVALRERKQQDAYKVSFPESGHFSPAMTVIEAKEQQQIVNH
TINNHEETVRRYYLLNREYGLTYKEIALQEGVSEKTVERYIGRVLRSLRSRLATIFFIW
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgttccaattctgaaaatactgctgcaattttcgacaggatctttaaagagacc
tggtcgggcactgttgcatatcttataaaaataagtaataataatgaactagccgaagac
ctggcgcaggaagcctacctgaaagcctggcaaaaattccacctgcttcctggagaagaa
actgaaatagcccgttacatccttgtcattgcccgtaattgttttcttgaccacctgaaa
gttgcgctgcgggaacgtaaacagcaggatgcgtataaggtaagtttccctgaatccgga
catttttctccggctatgactgttatagaagctaaagaacaacagcaaatcgttaatcat
actattaataatcacgaagaaacggtgcgccgttattacctgcttaatcgcgagtacgga
ttgacttacaaggagatcgcccttcaggaaggggtgtctgaaaaaacggtggaacggtat
ataggcagagtactccgctcgcttcgttcacgtctggctactatcttttttatctggtaa
DBGET
integrated database retrieval system
