Chitinophaga sancti: SIO70_27050
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Entry
SIO70_27050 CDS
T09582
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
csac
Chitinophaga sancti
Pathway
csac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SIO70_27050 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csac03400
]
SIO70_27050 (ung)
Enzymes [BR:
csac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SIO70_27050 (ung)
DNA repair and recombination proteins [BR:
csac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SIO70_27050 (ung)
Prokaryotic type
SIO70_27050 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
LED_rpt
Motif
Other DBs
NCBI-ProteinID:
WPQ66587
LinkDB
All DBs
Position
complement(6744920..6745591)
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AA seq
223 aa
AA seq
DB search
MDVKIEASWKEVLKDEFQKSYFEQIALHLKQEKALNRTIYPPGNLIFNAFDKTPFDKVKV
VLLGQDPYHGPGQAHGLCFSVQDGVKPPPSLVNIFKELHADLGLPIPQGGNLTKWAEHGV
LLLNAFLTVRANEPASHSKVGWENFTDAVIRKVSENKKDVVFILWGRFAQDKQVLIDATK
HHILKAAHPSPFSADKGFFGCRHFSKTNEMLAKAGIEPVDWSL
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atggacgttaaaattgaagcaagttggaaagaagttttaaaagatgaattccagaaatct
tactttgaacaaatcgccctccatctcaagcaggagaaggctttgaaccgcaccatttac
cctcctggcaaccttattttcaatgctttcgacaagactcccttcgataaagttaaagtt
gttttattaggacaagacccttatcacggtcccggacaagcacatggtttatgtttttct
gtacaggatggcgttaaacctccaccttcccttgtgaatatttttaaggagctgcatgct
gaccttggcctgcctattccacaaggagggaacctcaccaaatgggcagagcatggcgta
ttgctcctgaatgcatttctcactgtccgcgccaatgaacccgcttctcactcaaaagtc
ggctgggaaaactttacggatgcggtaatcagaaaagtgtcagaaaataaaaaagatgtg
gtatttattctttggggacggtttgctcaggacaaacaggtactgatagatgctaccaag
caccatattctgaaagcggcgcatccatcgcctttcagtgctgataaaggattctttggt
tgcaggcacttttctaagacaaatgaaatgctggcaaaagcgggtattgaacctgtggat
tggagtttataa
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