Chitinophaga sancti: SIO70_27570
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Entry
SIO70_27570 CDS
T09582
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
csac
Chitinophaga sancti
Pathway
csac02024
Quorum sensing
csac03060
Protein export
csac03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
csac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SIO70_27570 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SIO70_27570 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SIO70_27570 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
csac02044
]
SIO70_27570 (secDF)
Secretion system [BR:
csac02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SIO70_27570 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
ACR_tran
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
WPQ62126
LinkDB
All DBs
Position
complement(6857696..6860890)
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AA seq
1064 aa
AA seq
DB search
MQLKGLVRFFAGALILISVYYLSFTFLVRSYESKVDLQAKNDVLKTNKSAVEKYPNSKEQ
QAFYQDTLTDLIKVRRQRILDSTSNQQIAGFPWYITYTKAKERELNLGLDLQGGMNVVLD
VSVEDVIRSLSGHSTDAAFNQALRNAAEAKKTSQSDFVTLFGQEYQKVAPNGRLATIFAN
AYQKDINFNSSNADVLKVIRSEAGAAIKNTYLVLQKRIDKFGVASPNISLDESKGIISVE
LAGVDNPDRVRKYLQASANLEFREVYRNDADFFNNVLVKMNEALKNVSTPQPATADTAAA
ATVDTVKAGKAAADTSKEGSLASFMNDSAKDKNGKVDSAKLMANAEKEFMKSNPLFGILH
PNVTQEGPYPSATIGRILPSDTATFKAYLTLPAVRAVMPKDLVFAFGPENKTDRHGVIEV
FGLKINPANPAPRVSGERVVDAKQDFDQNGNAEISMTMDNVGAREWKKLTGELAPKGGAE
DDRSNLNYVAVVLDSIVYTAPSIINEIPGGHSQITGSFTVEEAKDLANILKSGKMPAPAK
IVQEQIVGPTLGAESIAAGAKSFIISFIVIFVLMLVYYNTAGFVANIALILNLLFTFGIL
ASLGATLTMPGIAGLVLTVGMAVDTNVIIFERIKDELMHGRNYQQAVEHGYKRSYAPILD
GHITSLLTAIILFYFGLGPVLGFATTQIIGLLLSLFCGIMISRIVTDYYTNKKRHFEYFT
PISRKIFKHAAFDFVGKRKYAYVISGIMILLGASSFIHGFRHGVDFDGGRSFTVRFEQPM
KTEEVRDVLEKEFGTEPYVKTIGNTNQLNITTNYKINEQSPEVDKEVTEKLYNGLKKFYD
NNVTYEVFSSPRYIVASQTVSPTISDDLRAGAVKATILSLIVIFLYILLRFNKWQYSIGT
LFSLLHDVMVTLAVFSYCHDLVPFPLEVDQHFIAAILTVIGFSMNDTVIVFDRIREYFRG
GQMKGQSRDTIINKAINDTLSRTVMTSLTVFLTILILFIFGGEVTRGFAFAMLIGVITGT
YSSIFVAAPVLVDFDKKNELANESEAIPVKDADKKGLAGAAVKK
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttaaaggactggttagattttttgccggtgcattgatccttatctctgtgtat
tacttgtctttcacgtttctggtccgcagctacgagagcaaggtagacctgcaagccaaa
aacgacgtcttaaagacgaacaaaagtgctgtggagaagtatccaaacagtaaagagcaa
caggctttttatcaggatacactgactgatctgataaaagtaaggagacaaaggatactg
gatagcaccagcaatcaacagatcgcgggttttccctggtacataacctatactaaagcc
aaggaaagagagctgaaccttgggcttgacctccaggggggtatgaacgtagtgctcgat
gtgagcgtggaagatgtgattcgttcgctgagcggtcactcgactgatgcagcttttaac
caggcgctgaggaatgcagctgaagcaaaaaagaccagccagtcggattttgtaacattg
ttcgggcaggaataccagaaggtagctcctaacggtcgtctggcaaccatttttgccaac
gcttaccagaaagacatcaatttcaacagctctaacgcggacgttctgaaagtgatccgt
agcgaagcaggagctgccattaaaaatacttacctcgtactgcaaaaacgtattgacaag
tttggggtagcttctccaaacatcagcctggacgaaagcaaaggtattatctccgtagaa
ctggctggggtagacaaccctgatcgtgtaaggaaatacctgcaggcaagtgcgaacctg
gagttccgcgaagtttacagaaacgacgcagatttctttaacaacgtactggtgaagatg
aacgaagcattgaaaaatgtttccacccctcaaccagccactgctgatactgctgctgct
gctacagtagatactgtaaaagctggcaaagctgctgctgatacttctaaagaaggtagc
cttgcttccttcatgaatgattctgcaaaggataagaacggtaaagttgactctgccaag
ctgatggcgaacgcagaaaaggaattcatgaagtctaacccactgtttggtattctgcat
ccgaacgttacacaggaaggtccatatcctagtgctactatcggtagaatcctcccttct
gacactgctaccttcaaagcttacctgacattgcctgcggtgagagccgtaatgcctaaa
gacctggtatttgcttttggtcctgaaaataaaacagatcgccatggtgtgatcgaagta
tttggtctgaaaatcaatccggctaacccagctccacgtgtaagcggtgaaagagttgta
gatgctaaacaggatttcgaccagaatggtaatgctgagatcagcatgactatggataac
gtaggtgcgagagaatggaaaaagctgaccggcgaactggctcctaaaggtggcgcagaa
gacgatcgcagcaacctgaactatgtagcggtggtactggatagcatcgtttacacagct
ccttctattattaatgaaattcctggaggtcactcccagatcactggtagctttaccgtt
gaagaggcgaaagaccttgcaaatatcctgaaatcaggtaaaatgcctgctccggctaaa
atcgttcaggagcagattgtcggaccaaccctgggtgctgaatctatcgcagctggtgct
aaatccttcatcatttccttcatcgtgatcttcgtactgatgctggtatattataatact
gctggtttcgttgcaaacatcgcgctgatactgaacctgctgttcaccttcggtattctt
gcttcgctcggtgcgacgctaacgatgcctggtatagccggtctggtactgactgtaggt
atggccgtagatacgaacgtaatcatctttgaacgtattaaggacgaactgatgcatggc
agaaattaccagcaggcggtggaacatggttacaagcgttcttatgcgcctatactggat
ggtcacatcacctccctgctcactgcgattatcctgttctacttcggtctaggtcctgta
ctgggctttgctaccactcagatcatcggtctgttactgtccctgttctgtggtatcatg
atctcccgtatcgtaactgattactataccaacaagaaacgtcacttcgaatatttcact
cctatttccaggaagatcttcaagcatgcagcttttgacttcgtaggtaagagaaagtat
gcttatgtgatctctggtatcatgatcctgctgggtgcctcttccttcattcacggtttc
cgtcacggtgttgactttgatggtggtcgtagtttcactgttcgtttcgaacagcctatg
aagacagaagaagtacgtgacgtactggaaaaagaatttggtacagagccgtatgtgaaa
actatcggtaacactaaccagctgaacattactaccaactataagatcaacgaacagagt
cctgaagttgataaggaagtaactgagaaactgtacaatggtctgaagaaattctacgat
aataatgtgacttatgaagtattctcttcaccccgttacatcgtagcttcccagacagta
tcaccaaccatctctgatgacctgcgtgcaggtgcggtgaaagcgacgatcctgtcactg
atagtgatcttcctgtacatcctgttacgattcaacaaatggcagtattctatcggtacc
ctcttctccctgttgcatgacgtgatggtaacactggcggtattctcttattgccatgat
ctcgtaccgttcccactggaagttgaccagcacttcattgcggcaatactaacggtgata
ggtttctccatgaacgataccgtgatcgtatttgaccgtatccgtgagtacttccgcggt
ggtcagatgaagggtcagtcaagagacaccatcatcaacaaggcgatcaacgatacactg
agccgtacagtaatgacgtctctgacagtattcctgaccatcctgattctcttcatcttt
ggtggtgaggtaacccgtggtttcgcatttgcgatgctgattggtgtaataaccggtact
tactcatctattttcgtagctgcaccggttctggtggacttcgacaaaaagaatgagctg
gctaatgaaagcgaagcaattcctgtaaaagatgcagataagaaaggcttagctggcgca
gctgttaagaaatag
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