KEGG   Chitinophaga sancti: SIO70_29005
Entry
SIO70_29005       CDS       T09582                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
csac  Chitinophaga sancti
Pathway
csac03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csac00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SIO70_29005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csac03019]
    SIO70_29005
   03016 Transfer RNA biogenesis [BR:csac03016]
    SIO70_29005
Enzymes [BR:csac01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     SIO70_29005
Messenger RNA biogenesis [BR:csac03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     SIO70_29005
Transfer RNA biogenesis [BR:csac03016]
 Prokaryotic type
  tRNA degradation factors
   SIO70_29005
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 S1_RRP5 KH-I_KHDC4-BBP RNase_II_C_S1 HutF_N YfcL KH_Vigilin
Other DBs
NCBI-ProteinID: WPQ62405
LinkDB
Position
complement(7260735..7263137)
AA seq 800 aa
MNLTPKSVNFDIGDGRIVTLETGKLARQADGAVTVRLGNCILLATVVANKTPKAGQSFFP
LTVDYQEKFASAGRIPGSFFKREGKLSDYEVLISRLIDRALRPLFPDNYFCDVQVLVTLI
SSDTEVVPDALACLAASAALAVSDVPVQEIISEVRVARIEGQLVINPNRSQLEKADMDFI
IGATEKNIMMVEGESKECSEEDIIKAIEFAHEAIRVQVKAQEQLRDLAGITAKREYTLPY
ENEELKAKIIAFAKDRILAVAKSGSGKHERGDAFEKISEELKESLGELSDEDAALVGRYF
HDLEKEVIRNMILDESVRLDGRSLDQVRPLNMEVDILPSPHGSALFTRGETQSLTTVTLG
TPDDELLIESAATSKYSKFILHYNFPPFSTGEVKPMRGPGRREVGHGNLAMRSLKQMMPG
SEYAYTVRVVSDILESNGSSSMATVCAGSLALMDAGVPLPKHVSGVAMGLISRASDGKWA
VLTDILGDEDHLGDMDFKVTGTRDGICGIQMDIKVDGLSMDVMRKALEQARKGRLHIIDA
MYGCLEGARPEPKPHAPRMEKLIIDREFIGAVIGPGGKVIQEIQRETGTTINIEEVGETG
EVSIFSAQKEGLEKALTWIKGIVAVPEIGEVYESTVKSVMPYGAFVEFLPGKQGLLHISE
VSWKRLENMEGVLTEGEKVKVKLVGTDPKTGKFKLSRRILMPKPEGYVERPEGDRPERSD
RGDRGDRRDGGDRGGRGGDRGGFRNDRGGDRGGDRGGNRGGGDRGGFRGDRDGGDRGQRP
QQDPPISSQADEPMEPMFDE
NT seq 2403 nt   +upstreamnt  +downstreamnt
atgaatctgacacctaaatcagttaatttcgatataggagatggccgcatagtcactctt
gagactggtaagttagcccgccaggctgatggtgctgttacggttcgtctgggaaattgt
atcctcttagctactgttgtagccaacaaaacacccaaagccggacagtcattctttccc
ctaacagttgattatcaggaaaaatttgcttctgctggtcgtatccctggttcttttttc
aagagagaagggaaattatccgactacgaagttttaatatcacgtttgatcgaccgcgca
ctgcgccctttgttcccggataattatttttgcgatgtacaggtattggttaccctgata
tcttctgatactgaggtagttcctgatgcgctggcatgcctggctgcatctgctgcactc
gcagtatctgatgtacctgtacaggaaatcatttctgaagtaagggttgcccgtattgaa
gggcaattagttataaatccaaaccgttcccagctggaaaaagctgacatggacttcatc
atcggtgctactgaaaagaacatcatgatggtggaaggtgagagcaaggaatgtagcgag
gaagatattattaaagcaattgaattcgctcacgaagcaatccgtgttcaggtgaaagcg
caggaacaactgcgtgacctggctggcataactgctaaacgtgaatatacccttccttat
gaaaatgaggaactgaaagcgaagatcattgcatttgctaaagaccgtatcctggcagta
gctaagtccggttcaggcaaacatgagcgtggtgatgcttttgagaagatcagtgaagaa
ctgaaagaatctctcggcgaactgtctgatgaagatgcagcactggtaggcagatatttc
catgacctcgaaaaagaggtgatccgtaacatgatcctggacgaaagcgttcgtctcgat
ggccgtagcctcgatcaggttcgtccgctgaacatggaagttgatatcctgccttctcct
cacggttctgccctgtttacacgtggtgaaacacagtcactgactactgttaccctcggt
actccggatgatgagctgctgatcgaaagcgctgctacttccaagtattctaaatttatc
ctccattataacttccctccgttctctacaggtgaagtaaagccaatgcgtggtcctggc
cgtcgtgaagtaggtcatggtaacctggctatgcgttccctgaagcagatgatgccaggt
agtgagtatgcttacacagtacgtgtagtatccgatatcctggaatcaaacggttcttct
tcaatggcgactgtttgtgctggttccctggcgctgatggatgcgggtgtacctttgcct
aaacacgtatctggtgtggcaatgggtctgatctcccgtgcttctgatggcaaatgggca
gtattgacagatatcctcggcgatgaagatcacctgggtgatatggactttaaagtaact
ggtacccgcgatggtatctgtggtatccagatggacatcaaggtagacggtctgagcatg
gacgtaatgcgtaaagcattggaacaggctcgtaagggtcgtctgcacatcatcgatgca
atgtacggttgcctcgaaggtgcccgtcctgaaccaaaacctcatgctccacgtatggag
aaactgatcatcgaccgcgaattcattggtgctgtaataggacccggtggtaaggtgatc
caggagatccagcgcgaaaccggtactaccatcaacatcgaagaagttggtgaaaccggc
gaagtgagcatcttctctgcacagaaagaaggtctggaaaaagcactcacatggatcaaa
ggtatcgttgcggtgccagagatcggtgaagtgtatgagtctactgtaaaatcagtaatg
ccttacggtgcattcgttgaatttctgcctggtaaacaaggcttgctgcatatttctgaa
gtttcatggaaacgtctggaaaatatggaaggcgtgctgaccgaaggtgagaaagtgaaa
gtgaaactggtaggtactgatccaaagaccggcaaattcaaactgagccgtcgtatcctg
atgccaaaaccagaaggttatgtagaaagacctgaaggtgaccgtccggagcgtagcgac
agaggtgaccgtggcgatcgtcgtgatggcggtgatcgtggtggcagaggtggcgaccgt
ggtggtttccgcaatgatcgcggtggcgatcgtggtggtgaccgcggaggaaacagaggc
ggcggcgatcgtggtggtttccgtggtgaccgcgatggcggtgatcgtggtcagcgtcca
caacaggatcctccaatctcttcccaggccgatgagccaatggaaccaatgtttgacgaa
tag

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