KEGG   Chitinophaga sancti: SIO70_30475
Entry
SIO70_30475       CDS       T09582                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
csac  Chitinophaga sancti
Pathway
csac02020  Two-component system
Brite
KEGG Orthology (KO) [BR:csac00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SIO70_30475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csac03021]
    SIO70_30475
Transcription machinery [BR:csac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SIO70_30475
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 PhyR_sigma-like Sigma70_ECF Ogg-HhH HTH_23 HTH_28 GerE DUF134 DSBA
Other DBs
NCBI-ProteinID: WPQ62688
LinkDB
Position
7622290..7622916
AA seq 208 aa
MFYVCPFSINTLEFIDIKYQEELLIQLRNGAETAFNALYHAYSKPIWLRILRLVKDKDVA
DELLQEVFINIWKNRQQIDSEKSFKAFIYTVAQNLVYNYFRKNASDSNLLQNLLLQSSQH
YLNVEQLMEERELRRFLDKAIDQLSPQRKRAFILCKVEGRSYEEASKIMGVSTATINSHI
TQSLQFLKEYTLKHLKFIILILFTGLDR
NT seq 627 nt   +upstreamnt  +downstreamnt
atgttttatgtttgtccattctccataaatactttggaatttatagatataaaatatcag
gaagagttactcattcagctcagaaatggtgccgaaacggcttttaatgcactgtatcat
gcttatagtaagcccatttggctgagaattttgcgtttggtaaaagacaaagatgtcgca
gatgagttactacaggaggtatttattaatatatggaagaacaggcagcagatagattcg
gaaaaatctttcaaggccttcatttatacagtcgcccagaacctggtatataattacttc
cggaaaaatgcgtcggattccaatcttttgcaaaacctgcttttacagagctctcagcat
tacctgaatgtagagcagctcatggaggagcgggagctcaggcgatttttggataaagcg
atagaccagttgtctccacaacgtaagcgggcttttatattatgtaaggtagaaggacgt
agttacgaggaggccagtaaaataatgggggtttccacagcaactatcaatagccatatt
acgcagtccctgcaattcttaaaagaatatacacttaagcatcttaaatttattatcctg
atcctgttcacggggttggatcgataa

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