KEGG   Chitinophaga sancti: SIO70_32055
Entry
SIO70_32055       CDS       T09582                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
csac  Chitinophaga sancti
Pathway
csac02020  Two-component system
Brite
KEGG Orthology (KO) [BR:csac00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    SIO70_32055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csac03021]
    SIO70_32055
Transcription machinery [BR:csac03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     SIO70_32055
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 GerE HTH_40 HTH_10 HTH_38 Sigma70_r2 HTH_Tnp_ISL3 NUMOD1 vWA_IML1 Sigma70_ECF HTH_11 ArsR HTH_5 HTH_71 UPF0122 HTH_23 PF0610-like_N HTH_24 HTH_30 RecX_HTH1 wHTH_Par DUF1871 DUF722
Other DBs
NCBI-ProteinID: WPQ63001
LinkDB
Position
complement(8000231..8000677)
AA seq 148 aa
MYNRLKSKEVTEEIIQEVFFSLWNRRAELTLTHSLNAYLFTAVKYQLFNYMKADKVRRDY
ASSYAHFVGADHSNEQYIEYTDLVNAVEKEVSRLPEKCQQVYRMSRNEHRSIQEIATTLN
ISHKTVENHLTRALKHLRIAFREYFWLF
NT seq 447 nt   +upstreamnt  +downstreamnt
gtgtacaacagattgaaatctaaggaagtgaccgaagagattattcaggaagtatttttt
tccctctggaaccgccgcgcagaattgacgctcacccattctctcaatgcttatttattt
accgccgtcaaataccagttgtttaattacatgaaggctgacaaggtacggagagactat
gccagcagttatgcacattttgtgggtgcagaccatagtaatgaacaatacatagaatat
acagacctggtgaatgctgtagaaaaggaagtatcgcgccttcctgaaaaatgccagcag
gtataccggatgagccggaacgagcaccggtctatacaggaaattgccactaccctcaac
atttcgcacaagactgtggaaaaccacctgacaagggccttgaagcacctgcgtatcgcc
ttcagggaatatttctggctgttttaa

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