Cololabis saira (Pacific saury): 133418398
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Entry
133418398 CDS
T09849
Symbol
lama2
Name
(RefSeq) laminin subunit alpha-2 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04510
Focal adhesion
csai04512
ECM-receptor interaction
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133418398 (lama2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133418398 (lama2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133418398 (lama2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
DUF948
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
133418398
NCBI-ProteinID:
XP_061563030
LinkDB
All DBs
Position
18:complement(18030559..18247491)
Genome browser
AA seq
3244 aa
AA seq
DB search
MKRLVPVLIAALLWQCSSAQQRGLFPAVLNLATMADISANATCGSNGPEMFCKLVEHVPG
QPVRNPQCRICNERSTNSFERHPIEYAIDGTNRWWQSPSIMNGMDNHYVTITLDLKQVFQ
IAYVIIKAANSPRPGNWILERSIDGVTFDPWQYYAITDTDCLTKFNITPRRGPPSYTRDD
EVICTSFYSKIHPLENGEIHTSLINGRPSADDPSPTLLNFTSARYIRLMFHRIRTLNADL
MTLTLHDPKDVDPIVTRRYYYSIKDVSVGGMCICYGHAKACPLDLATKKFSCECEHNTCG
ESCDQCCPGYHQQPWMAGTFLTRHICEKCNCHGKADDCYFNQTVADLSLSLDAHGQHRGG
GVCIGCRDNTAGINCQSCISGYYRPTGVGADEEDPCVPCSCDPHGSVSQTCVADSNEATP
SQPAGSCWCKEGFGGLRCDRCAVGYKDYPSCQRCNCSVEGSANTDPCVTPCVCKENVEGE
NCDRCKLGFFNLQRDNQRGCEKCFCMGVATQCSASRWTYQNETALLGWHLVGDTGGRVWS
VHRQTPPYLTVRHSDVVNDLGSAYYWNAPGLYLGNKLTAYGGSVVFSVSYTTDQQEQMAI
RVTSEPDLIIQGGGFTIIDKRFGQQVYPSSPSTSRIVLLPEHFLVSETGQPISRRDFMSV
LGNVTSVMVRASYSTDISAVYRLHSFSMQVADPSARGESTASAVEMCSCPPGYAGTSCEA
CIPGFRRVNGNLYNGVCEPCRCHGHATQCHEVTGHCMDCSHNTAGYHCDTCLPGYYGNAT
RGSPADCQPCACPLNLPSNNFSPICHLSEDGELLCDQCQPGYTGPRCDRCSNGYYGEPGT
PGGSCQPCQCNSNLDLSVPGSCDPIIGQCLRCRQGYGGVTCDSCADGYYGDAITAKNCQP
CQCHTNGSMSEVCDKQSGQCRCKENTVGRQCNKCMPNRWWDAERLGCMPCRCSPRGSISQ
RCDTEGRCICRPGFVGRRCDQRRQSYERRETQRPVEQVPLEDVRQRWGGSSRTGGCPRGA
YRPQTGPETHGVSTGGMCVPCHCNSFGSKSFDCDELGQCRCQPGITGLKCDRCARGFFNF
QEGGCAPCQCTHVGNNCDANTGQCICPPNAIGERCDRCAPNHWGHDITTGCKECGCNAIG
SVTQQCNMNTGCCFCHESFRGEKCDECQIGYRDFPQCIQCQCNVAGSDSQTCSLERGVCA
CADRTGKCGCKENVEGHDCDRCKADTFGLSLKNPLGCSKCYCYGLSHSCTEAQGLIRMWL
ALKPEQTVLYLVDKSNAAETRTGVSFQHPEILAHADLVSPTVSEPYYWRLPEQFTGSMIT
AYGGQLKYAVFYEAREETGPSSYEPQVIIKGGANHNIVMTRHITGLQIGQLTRHEVDMTE
HEWKFADGRSITREDFMDMLFYVDYILIKASHGNAMRQSRISEISLTVAEEGTPTQESEK
AHQIEKCECPAGYSGLSCEECAAGFYRLRPDSPVSVPASRMPTAAGMGSCVRCQCSGHSS
TCDPETSICQNCQDNTEGDRCERCAPGFYGVVRGSPDDCKPCACPLTNPENNFSPSCVTE
GFDDYRCTACPEGYEGKYCERCATGYHGNPRMPGGHCEECKCSTWGALPGPCDPVTGQCR
CRVGASGMSCDQCMERHVCGASGIISCDDECSGLLISDMDRLYRIITDVTLTTPLPPPYK
VLYRFENMTEELKHMLSPQKAPERLLQLADSNMGSLVVEMDQLHSRATKVSADGEQVEDD
ADRIHKRAEDLEQFIKDTLLGAKDLQYKAAELNQTLSRRDGTPDKSLREMKEEIQAMLEE
MRKRQLGGMRGTAEEEKDLAEELYQKVKRLFGDPHQATEDLKAEITEKLSDHEGKLQEAQ
DLLHSAQGKTRQAGSLTEQNRANLTALERKRAAVGALKQEAEKVLGEGEHLLEEANQLSD
NVNKELEDLEEMGRELSPLHNQLDRKVRRLTDGLSDGSLDNLVYDAEQHAKQLNESAVLL
DGILAEAKNLSFNATAAFNAYGNIKANVDAAEKEAKAAKQRANEALALALGPDVPMKEAT
QSSLQKSQVLLNKAKQLQNDVKENADSVAGLKGRVKAARDKTKDLLTAVNGTVAVLNAIP
SDTSANLAATKAVAADANSTAIDVLERLGDLNLRLGGLQHNYSELENTVSAANQKIQDPE
KNIHAAGAKVKELEDEADRLLEKLQPIKKLQDNLRRNISQIKELIHQARKQANSIKVSVS
SGGDCLRSYRPEIRKGRYNTIVLHVKTTTPDNLLFYMGSAKYVDFLALEMRKGKVNFLWD
VGSGVGRVEYPHQTIHDGNWHRIEASRNGLNGTISVYPLEGPMAGMMPTPASANSPTSFT
ILDVDQNAYLFVGGILGTVKKADAVRTSTFTGCMGETFLDSKPIGLWNYRDREGDCKGCA
VSPQRTDSEGTVQLDGDGYAAVGRPTRWNPNVSAITFKFRTFSSEALLMYLATEDMKDFM
SLELSGGKVKVNFDLGSGASSAVSDKRHNDGRWKALTMSRNKKQATVTVVDIDSSAEEKI
VATSRGSATGLNLGEKQKIYFGGLPTIGNYRSEVTLKRYAGCLRDIEVSRTPYNLLSSSD
YTGVTKGCNVENLYTVSFSKPGYVELGGFSLAVGTEISLSFSTLADTGIILLAVGGPSTI
PHQARNSKRRRRQSGEPYLSVMLNKGSLEVVVFTGSHKPRPVIRTAEQGILNDGREHSLR
IERLAGRSFAVQVDEEDKREAALPNDQPISLKQIFLGGIPAEVERTSNRANIPFQGCIWN
LMVNAVLSDFSQPVSFENAEIGQCPSLAPLSPLPPKEEVPEEESKPAGSVTAEAPVTPRP
EPPAVDVPPTPPPARHTAAATAAPPTAADSDSCASAVDPTALEKAYQFGLTRNSHMSFAF
DDNKVRERLILEFQLRTKEQSGLVLYMARINHADFVSIQIKDGQLCLGYDLGHGNISGCV
PYSINDGNWHLIRITRNKQRGLILVDGKYSKQLISPNKADLLDVVGVLYVGGLPLNYTTK
RIGPIVYSVNGCIRNLKMVGAPASTKTGSTGRFVSTIEDFKLNMATPTSSLMVGKCFDAT
EAGTYFEGTGYLKAVAAYRVGLDVSIALEFRTSRTSGVLLAVSNQASDGLGLEINEGKLL
FHVDNGAGRITAEHVPDGDGFCDGKWHSVTASKLRHRLELEVDGKKSQAESPNARSNTCD
TSDPIYVGGHPGGVRQAALSTSTSFRGCMRNLKITKASKTMDVKFNKALEIKGVQPLSCP
AAAA
NT seq
9735 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgactcgtgcccgtgcttatcgctgcgttgctatggcaatgcagcagcgcccag
cagagaggactcttcccagctgtgttgaacctggctacaatggcggatatatcagctaat
gctacatgtggttcaaacggtccagaaatgttctgtaaactggtggaacatgtaccaggc
cagcctgtgagaaacccacaatgtcgaatctgcaatgaaaggagtacaaactcatttgag
cgtcatcctattgaatacgccatagatggaaccaaccgctggtggcaaagtccctccatc
atgaatggaatggataatcattatgtgaccattacactggatttgaaacaggttttccag
attgcctatgtgataataaaggcagctaactcacctcgtccaggtaattggatcttggag
cgctcaatagacggcgtgacctttgatccctggcagtattatgctatcacagacacggac
tgcttgactaagttcaacataactccacggagaggacctccctcctacaccagagatgat
gaagtaatctgcacatccttttactcaaagattcatccactggagaatggagagatccac
acatctctgatcaatggtcgacccagtgcagatgacccctcccccaccctactgaacttc
acctccgcccgctacatcaggctgatgtttcaccgaatcagaacgctcaacgccgacctc
atgaccctgacacttcacgaccccaaagatgtagatcccattgtgacgagacggtactac
tactccattaaggacgtttcggttggagggatgtgcatctgttacggccatgccaaagcc
tgtccgctcgacctcgccacaaagaagtttagctgcgaatgtgaacacaacacatgtgga
gagagctgcgatcagtgttgcccgggttaccaccagcagccctggatggcaggaaccttc
ctcacgcgtcacatctgtgagaagtgtaactgccatggtaaggcagatgactgctacttt
aatcaaacagtggctgatctgtcactcagcctggacgcacacggtcaacacagagggggc
ggcgtttgtattggctgccgtgacaacacagctggaatcaactgtcaaagctgcatttct
ggatactacagaccaacaggggtcggtgctgatgaggaggacccctgcgttccctgctca
tgtgaccctcatggttctgtcagtcaaacttgtgtcgccgactcaaacgaagctacgccc
agtcagccagcagggtcgtgctggtgcaaggagggttttgggggtctgcgatgtgacaga
tgtgctgtcggttataaggactacccatcctgccagcgctgtaactgcagcgtggaagga
agcgccaacactgacccatgtgtaacaccctgcgtgtgcaaggaaaatgttgagggagag
aactgcgaccgttgtaaactcgggttcttcaacctgcagcgtgacaaccagcgtggctgt
gagaagtgcttctgcatgggtgtcgctactcagtgctctgcatccagatggacatatcag
aatgagaccgcgctgttaggctggcacctggttggagacacaggagggagagtttggtct
gttcacagacagacacctccatatttgactgtcagacactcagatgttgtgaatgatctt
ggctccgcctactactggaacgcacctggactatacttggggaacaagctgacagcttat
ggaggaagtgtggtcttctctgtgtcgtataccacggaccaacaggagcaaatggccatc
agagtcacctcggagccggatctcatcatacagggaggtgggtttacgattattgacaaa
aggtttggccagcaagtgtacccgtcctcacccagcaccagccgcattgtccttcttcct
gagcacttcctggtctcagagacggggcagcccatcagtcggagagacttcatgtctgtg
ttgggtaatgtgaccagcgtgatggttcgggcctcttacagcacagacatcagcgccgtt
tacagactccactcattctcgatgcaggtagcagatccttctgccagaggggagagcaca
gcatctgctgtagaaatgtgttcttgtcctcctggatatgctggaacctcctgtgaggca
tgtattcctggttttagacgagttaatgggaatctgtacaatggtgtgtgcgaaccttgt
cgttgccatggacacgccacacaatgccacgaggtcacaggacattgtatggactgctca
cacaacactgctggctaccactgtgatacctgcctacctggttactatggcaatgccacc
cgtgggtcacctgcagactgtcagccctgcgcctgcccgctcaatcttcctagcaacaac
ttcagtcccatctgccacctaagtgaggacggggagttgctgtgcgaccagtgtcagccc
ggctacacaggacccagatgtgacagatgttccaacggatattacggagagcccggtaca
ccaggggggtcctgccagccatgccaatgcaacagcaacctggatttatctgtacctggc
agctgcgatccaatcataggccagtgtctgaggtgtcgccaaggttacgggggcgtgact
tgtgacagctgtgctgatggttactatggagatgctataacagcaaagaactgccagccc
tgtcagtgccacactaacgggtccatgtccgaggtgtgtgacaagcagagtggtcagtgc
cggtgcaaagaaaacacagttggaagacagtgcaacaagtgcatgcctaaccgctggtgg
gatgccgagcgtctggggtgtatgccctgccgctgcagcccccgtggctctatctctcag
cgctgtgataccgagggccgctgcatctgtcgccccggcttcgtgggccggcgctgtgac
cagcgtcggcaaagttacgaaaggcgggagacacagcggccagtggagcaagttcccctg
gaagatgtgcggcagagatggggaggctcttcccggacggggggttgtcccaggggagcg
tacaggcctcagacagggcctgagactcacggcgtcagcaccggtgggatgtgcgtcccg
tgtcactgcaactctttcgggtccaagtcattcgactgtgatgaactgggccagtgtcgg
tgtcagccgggcatcacggggctcaaatgtgaccgatgcgcacgaggattcttcaacttc
caggagggaggctgcgcaccctgccagtgcacccatgtgggaaacaactgcgacgcgaac
accggccagtgcatctgtcctcccaacgccattggtgaaaggtgcgaccgctgcgcaccc
aaccattggggccatgacatcacaaccggatgcaaggagtgtggttgcaacgcgatcggc
tcagtgacccagcagtgcaacatgaacacaggctgctgcttctgccacgagtctttcaga
ggagaaaaatgcgatgaatgtcaaattggatacagagactttcctcagtgcatccagtgc
cagtgtaacgttgcaggatcggacagccagacctgcagcctggagagaggagtgtgtgcc
tgcgcagaccgaacaggaaaatgtggctgcaaggaaaatgtggaaggacacgactgcgat
cgctgcaaagccgacacgtttggattatcgttgaaaaatccactgggctgcagtaaatgt
tactgttacggactaagtcactcctgcacagaggcacagggactaataaggatgtggtta
gcgctgaagccagagcagactgtcctctacctggtggataagtcaaatgctgctgagaca
agaacaggagtcagcttccagcaccctgagatcctcgcccatgcagatctggtctcgcca
actgtgtcagaaccgtactactggagactaccggaacagttcaccggctccatgatcaca
gcttacggtgggcagttgaaatacgcagtgttttacgaagccagggaggaaaccggtcct
tcctcctatgagcctcaggtcatcattaagggcggcgctaaccacaacatagtgatgaca
cggcacatcacaggacttcagattggtcagctcacccgccatgaggtcgacatgacagag
catgagtggaagtttgcagacggccggtctataactcgagaagacttcatggacatgcta
ttctatgtggattacatcttaattaaggcgtcacatggcaacgcgatgagacagagccgt
atttcagaaattagtctcactgtggcagaagagggtacgccaactcaggaaagtgagaaa
gcccatcagatagagaagtgtgaatgtccggctggatattctggactttcctgcgaggag
tgcgccgcaggtttctaccgactccgcccagactcccctgtatcagtcccagcatccaga
atgcccacagctgcaggcatgggcagctgtgtccgctgtcagtgcagtgggcactcttcc
acttgtgaccctgagacatccatatgccagaattgtcaagacaacactgagggtgatcgg
tgcgagcgctgtgctcccggattctacggagtggtccgaggttctcctgacgactgcaaa
ccctgcgcctgcccccttaccaaccccgaaaacaatttcagccctagttgtgtaactgag
ggatttgatgactaccgctgcaccgcctgtcctgagggatacgaggggaaatactgtgaa
aggtgtgccactggttaccatggtaacccaaggatgccaggcgggcactgtgaagaatgt
aagtgttccacgtggggagcgctgcccggaccatgtgaccctgtcacaggccagtgccgt
tgcagggtcggtgcatcaggaatgtcgtgtgaccagtgcatggaaaggcatgtgtgtgga
gcatccgggatcatctcttgtgatgatgagtgctcaggtttgctgataagtgatatggac
cgcctgtatcgcatcatcaccgacgtcactctgaccacgcctctcccgccaccgtacaag
gtgttataccgctttgaaaacatgacagaggaactcaagcacatgctgtcacctcagaaa
gctccggagagactacttcaattggctgactccaacatgggatcactggtcgttgagatg
gaccagctgcacagcagggccacaaaggtgtcggctgatggagagcaggtggaggatgat
gctgacaggattcacaaacgagctgaggacctggagcagttcatcaaggacacgctgctg
ggagccaaagacctccagtacaaagctgctgagttgaaccagaccctctcgagaagagat
ggaactccagacaaaagcttgcgagagatgaaggaggagatccaggccatgctcgaggag
atgagaaaacgacagctgggaggaatgagaggcactgcagaggaggaaaaggatctagca
gaggagttgtatcagaaagtcaagagactgtttggcgacccccatcaggccacggaggac
ctgaaagcagagataacggagaagctgtcagaccatgaggggaagctccaggaggcccag
gacctattgcattctgcccagggcaagacgaggcaggccggctcgctgactgaacagaac
cgagccaacctgacagcgctggagaggaagcgagctgcagttggtgcactaaaacaggaa
gcagagaaggtcctcggcgaaggagaacacctactcgaggaggcgaaccaactctctgac
aacgtcaacaaggagctcgaggacttggaggagatggggcgagagcttagtcctcttcat
aaccagctggaccgtaaagttcgtcgcctcaccgatggcttgagtgacggcagcctggat
aatctggtgtacgacgcggagcaacatgccaagcagctgaatgaatccgcggtcctttta
gatggcattttggccgaggccaaaaacctttccttcaatgcaacagctgccttcaatgct
tatggtaacatcaaagccaacgtggatgcagcagagaaagaggcgaaggcagccaagcag
agggcaaatgaggcactggctctggctttagggccagacgtcccaatgaaggaagcaaca
caaagttctcttcagaaaagtcaagtactgctgaataaggcgaaacaactgcaaaacgat
gtcaaagagaacgcagacagtgtggcagggctgaagggcagagtcaaagcggcgagagac
aaaaccaaagaccttctcacagctgttaatggaactgtggcggtgctcaacgccattccc
agcgatacgagcgctaaccttgcagctacaaaggctgtagcagctgatgccaactccaca
gccatagatgtcctggagcgtcttggagatctgaaccttcgcctcggaggcctgcagcac
aactacagcgagctggaaaatactgtcagtgcagccaaccagaagatccaggacccggag
aaaaacatccacgccgcaggagctaaagtgaaggaattagaggatgaggctgacaggctg
ttggagaagctgcaacccatcaaaaagctgcaagacaatttaaggcgcaacatctcacaa
attaaagaactaatccaccaggcccggaaacaagctaattctataaaagtttccgtgtct
tcaggcggggattgtcttcgtagttaccgccctgaaatcagaaaaggaaggtacaacacc
atcgtacttcacgttaaaaccacaacacctgataatctgctcttctacatgggatctgcc
aaatacgttgatttcctggccttggagatgcgtaaggggaaagtgaatttcctttgggat
gtgggttcaggtgtgggaagggttgaatacccacatcagaccatccatgatgggaactgg
catcggatagaagcatctcgcaatggtctgaatggcaccatctcggtgtatcctctggaa
ggcccgatggctggcatgatgccaaccccggccagtgccaactcccccacatccttcacc
atcctggacgtcgaccagaacgcctacctgtttgtaggaggaatacttggcactgtcaag
aaagcagacgcagtaagaacgtccacattcacgggctgcatgggtgagacgttcttggac
agtaaacctatcggactgtggaactacagagacagagagggagactgtaagggttgtgct
gtcagcccccagcgcactgatagtgaagggacagttcagctggatggagatggatacgct
gcggttggaagacccaccaggtggaacccaaatgtttctgccatcactttcaagttccgc
acgttctcctctgaagctctgctcatgtatctggccactgaagacatgaaggacttcatg
tcactggagctgtcagggggtaaggtgaaagtgaattttgacctcggatcgggagccagc
agtgccgtatcggataaacggcacaatgatggccgctggaaagccctcaccatgtctagg
aacaagaaacaagccaccgtgactgtggtggacatcgacagcagtgctgaagaaaagata
gtagccacatctaggggctcagctactggtctgaacctcggggaaaagcagaaaatctat
tttggtggcctgccaacgataggaaactacaggtcagaggttactttgaagagatatgca
ggatgtctccgagatattgaagtctccaggacgccgtataatctactcagcagctctgat
tacacaggggtcactaaaggatgtaatgtagagaacctgtacacggtcagtttctcaaag
ccaggatacgtggagctgggtggcttctcgcttgctgtcgggactgagatcagcctctcc
ttcagcaccttagcagacactgggatcatcctactggctgttgggggaccttcaacaatc
ccccaccaggcccgcaattccaagaggagacgaagacaatcgggagagccgtacctgtca
gtcatgctaaacaaaggctctctagaagtcgtcgtgttcaccggcagccataaaccacgt
cccgtcatcagaacagccgagcaggggatactgaatgatggcagagagcactcactgcgc
atcgagaggctagctggcaggtcctttgcagtccaggtggatgaggaagacaaaagggaa
gcagcacttcccaacgaccagccaatcagcttgaagcagatcttccttggtggtattcct
gcagaagtggagcggacatccaacagagccaatatcccattccagggatgcatatggaac
ctcatggtcaatgctgtgctgtcagatttctcgcaacctgtttcctttgaaaatgctgaa
atcggccagtgccccagtctcgctccgctgtcacctcttccacctaaagaggaggtgccc
gaggaagagtccaaaccagccggttcagtaaccgccgaagctcctgtcacgccacggcca
gaacctcctgctgtggatgtgccccccaccccacctcctgccagacacactgctgctgcg
actgcagcaccacctactgctgctgactcggactcgtgtgcatcagctgtggacccgacg
gcgctggaaaaagcctatcagtttggactgaccagaaacagccacatgagcttcgccttt
gatgacaacaaagtcagagagaggctgatattggagtttcagctgaggacgaaggagcag
tctggcctcgttctctacatggcgagaatcaaccacgctgactttgtttccatacagatc
aaggatggacagctctgccttggttatgaccttggtcatggaaacatctctggctgcgtc
ccttactccattaatgatggcaactggcacttgatccgcataactcgtaacaagcagcga
ggtctaattttggttgatgggaagtacagcaaacagttgatcagtccaaataaggcggac
ctgttagatgttgtgggagtgttgtatgttggtgggttaccactaaactataccaccaag
agaataggaccgattgtctacagcgttaacggctgcattcgtaacttaaagatggtcgga
gctcctgcgagcaccaagacaggttcaacaggtcgctttgtgagcaccattgaagacttt
aaactaaacatggccacgcccacttccagtctcatggttggaaagtgtttcgatgccact
gaggccggcacctacttcgagggcaccggctatctgaaagcagtcgccgcctacagagtc
ggcctggacgtctcaatagcgttagaatttcgaaccagcagaaccagcggggtgcttttg
gccgtcagcaaccaagccagtgatggactgggtctggagatcaacgaggggaagctgctc
ttccacgttgacaacggagctgggcgaatcacagcagagcatgtccccgatggagacgga
ttctgtgatggcaaatggcacagcgtcactgccagcaagcttcgccacaggctggagctg
gaggttgatgggaagaagagccaagcagagtctcccaacgctcgctccaacacctgcgac
accagtgaccccatctacgttggaggacatcctggtggagttcgtcaggcggcgctttct
accagcacatctttcagaggttgcatgaggaacctgaagatcaccaaggcttccaagacc
atggatgtgaagttcaacaaggctctggagattaaaggggtccagcctctctcctgtcca
gctgctgctgcgtag
DBGET
integrated database retrieval system
