Cololabis saira (Pacific saury): 133418480
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Entry
133418480 CDS
T09849
Name
(RefSeq) neurexin-3b-like isoform X1
KO
K07377
neurexin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133418480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133418480
Membrane trafficking [BR:
csai04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
133418480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
133418480
NCBI-ProteinID:
XP_061563161
LinkDB
All DBs
Position
18:complement(17304007..17607192)
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AA seq
1700 aa
AA seq
DB search
MNPNSPTGHFLMLLSTMLSLSAGLEFTGSEGQWARYLRWDASSISNLSLQFKTSESKGML
LYFDDGGFCDFLLLAVSEGKLQLRVSIDCAETTVSSDKMVNDSHWHSAAINRHNLWTGLT
VDGRNKAGEVRPQRQFMNIVSNLFLGGLPGDIRTSAITLPSVLEIPPFKGIITDLHYGSK
LPTLINSQKVRLEMMGLCTRNPCENGGICSLADGETYCDCSRTGYVGRYCTEAVMRKPGL
AHLKAEQARDENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLLLHTGKSADY
VNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDIKVTRNLRQQSGIGHAMVTIS
VDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLREVVYKNNDIRL
ELSRLARIVDPKMKLQGDVVFKCENVPTLDPINFESPDSYLALPKWNTKRVGSISFDFRT
TEPNGLILFTHGMPQDRRDVKGQKSNKVDFFAVELLDGGLYLLLDMGSGTIKVKATQAKV
NDGAWHHVDIQRDGRSGIISVNSRRTPFTASGENEILDLEGDLYLGGLPNNRAGLVLPTE
LWTAMLNYGYVGCVRDLFIDGRSKDIRQIAQSQNVTGVKYTCTKTTGKHCDSSPCKNNGV
CKEGWNRFVCDCTGSGFWDSTCERESSILSFDGSMYMKVVMPNAMHTEAEDVSLRFMSQR
AFGLLMAATSRESADTLRLELDSGRVKLTVNLDCVRINCNTSKGPEVLYAGQKLNDNEWH
SVRVIRRGKNFRLVVDDDMAEGQMAGDHTRLEFNNVETGILTEKRFVSAPPSPFIGHLQS
LKFNGMQYIDMCKNGDIDFCELNAHFGMRFIVADPVTFKTKGSFLGLATLQAYTTMHLFF
QFKTTSPDGFIIFNSGDGNDFIAVELVKGFIHYVFDLGNGPSLLKGNSDSSLNDNQWHNV
VITRDASNTHTLKVDAKSVTQNVNGAKNLDLKGDLFIGGLGPNMYQNLPKLVVSREGFQG
CLASVDLNGRLPDLISDALFRTGQIDRGCEVAFTKADLQGPSTTCQEDSCANMGVCIQQW
ENFTCDCSLTSYTGTHCNDPGTTYIFGKGGGLITYTWPSNERPSTRTDRLAVGFSTTIKD
GILVRIDSAPRLGDYIMLHIEQGKVGVTFNIGTVDISVKETTTPVNDGKYHLVRFTRNGG
NATLQVDNWPINEHFPTGNSDIERYQMANKKIPFKYTRPVEDWLQEKGRQLTIFNTQATI
SIGGNDRKRPYQGQLSGLYYNGLKVLNMAAEGHANIRVNGSVRLVGDVPSSRGAARTTTS
VPPEMSTTFIETTTTLSTTTTRKQRSPPTVQTTDDIVSSAECSSDDEDLEECDSGHTGGE
LVIPVLVEDPIDIPSVSTRSPFIPLPPTLRPVLTIIETTKESLAMATEAGVPCLSDRGSD
DDCDGGDDGDDDDDDGMVISGFGSGEAFDSSLPPTDDEDFYTTFSLVTDKILTTSAYEGG
YKALAPKWESKDLRPSKASESGRTTPTSSLPDNRGTPPAAVPSDTPPKLPAGKMNNREVK
PPQPDIVLLPLPTSFDLDGTKPRGPFITSPMLRTVPAALPTMPNLVQRVPTEVIRESSST
TGMVVGIVSAAALCILILLYAMYKYRNRDEGSYQVDETRNYISNSAQTNGAVVKDKAPSS
SAKGSASSKRPKDKDKEYYV
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaaacagccccactgggcacttccttatgctgctaagtacaatgctgagcctg
agtgcagggttggagtttactggctcagaaggtcagtgggctcggtacctgcgctgggat
gctagctccataagtaacctgtcacttcagttcaaaacctccgaatcgaaaggcatgctg
ctctactttgacgatggcggattctgcgactttttgcttctcgctgtatctgagggtaag
cttcagcttcgtgtaagcatcgactgcgccgagaccaccgtctcttctgataaaatggtc
aatgacagccactggcactctgccgctatcaacaggcacaatttgtggactggcttaacc
gtggatggccggaacaaggcaggagaggttcgaccccagcggcagttcatgaatattgtt
agcaacctctttttgggagggcttccaggggacatccgcacttctgccatcaccttgccc
tccgtccttgagataccaccgttcaaaggaattatcactgacctccattacgggagtaag
cttcctacgttaatcaatagtcagaaggtacgcttggagatgatgggcctctgcacgagg
aacccttgtgagaatggcgggatctgctcactggcagatggagaaacctactgtgactgc
tccagaactggatatgtaggtcgatactgcactgaagcagtcatgagaaaaccaggcctc
gcacacctgaaggcagaacaagcaagggacgagaacgtggccaccttccgcggatcagag
tacttctgctacgacctgtcgcagaaccccatccagagcagcagcgacgagatcacgctg
tctttcaagacctggcagcgcaacggcctcctgctccacacgggcaaatccgccgactat
gtcaacctggctctgaaagatggggcagtttccctcgtcatcaatctgggttctggggcc
ttcgaggccatagttgaaccagtcaatggaaaattcaatgacaacgcctggcacgacatc
aaagtgacgcgcaacctgagacagcaatcaggcattggacacgctatggtgacgatctcc
gttgatgggatcctcaccaccaccggctacacccaggaggactacaccatgctgggctct
gatgacttcttctatgtgggcgggagccccagcaccgctgacctgccaggatccccagtt
agcaacaatttcatgggctgcctcagagaggtggtgtataagaacaacgatatcaggctg
gagctttcccgcctcgcccgcatcgtcgacccaaagatgaagctgcaaggcgacgtggtc
ttcaagtgtgaaaatgttcccaccctggaccccatcaacttcgagagcccggactcctac
ctggccctgcccaagtggaacaccaagcgcgtgggctccatctccttcgacttccgcacc
acggagcccaacgggctgatactcttcacccacggcatgcctcaggaccggcgggacgtg
aagggccagaagagcaacaaggtggatttctttgcggtggagctgctggacggagggctg
tacctgctgctggacatgggctcgggaaccatcaaggtcaaagccacccaggccaaggtc
aatgatggagcctggcaccacgtggacatccagagggacgggcgttcaggcatcatctca
gtaaatagccgcaggacgcctttcacagccagcggagaaaatgagatcctggacctggaa
ggtgacctgtacctggggggtctccccaacaaccgcgcgggcctggtgctgcccaccgag
ctctggaccgccatgctcaactacggctacgtgggctgcgtccgggacctgttcatcgac
ggacgcagcaaggacatccggcagatagcgcagtcccagaatgtgacgggcgtcaagtac
acgtgcaccaagacgacggggaagcactgcgacagcagcccctgcaagaacaacggcgtg
tgcaaagagggatggaaccggttcgtctgcgactgcacggggtccggcttctgggacagc
acctgcgaacgagagtcatcgatcttgtctttcgatggcagcatgtacatgaaggtggtg
atgccaaacgccatgcacaccgaggccgaggacgtctccctccgtttcatgtcccagcgt
gccttcgggctgctcatggccgccacgtcgcgcgagtctgcagacactctgcggctggag
ctggacagtgggagggtcaaactgacggtcaacctagactgtgtcaggataaactgtaac
accagcaagggccctgaggttctttatgccggacaaaagctcaacgacaacgagtggcac
tcggtgcgagtgatccgccgcggtaaaaacttccggctcgtcgtggacgacgacatggct
gaaggtcagatggcaggcgatcacacccggctggagttcaacaacgtggagacgggcatc
ttgactgagaaacgctttgtctcagctccaccgtcaccgtttattggccaccttcagagc
ctcaaattcaacggcatgcagtacattgacatgtgtaagaatggggacatcgacttctgc
gagctcaacgcacacttcggcatgcgcttcatcgtggccgaccccgtcaccttcaagacc
aagggcagcttcctggggctggccaccctgcaggcctataccaccatgcacctgttcttc
cagttcaaaaccacgtcaccggacggcttcatcatcttcaacagcggggacggcaacgac
tttattgctgtggagctggtcaaagggtttatccactacgtgttcgacctggggaacggg
cccagtctgctgaaggggaacagtgacagctcgctgaatgataaccagtggcacaacgtg
gtcatcacccgagacgcctccaacacgcacacactcaaggtggacgccaagtcagtcacc
cagaatgtcaacggagccaagaacctcgacctcaaaggtgacctgttcatcggaggtttg
ggacccaacatgtatcagaatctccccaagctggtggtttctcgggagggcttccagggc
tgcttggcctccgttgacctcaacggccgcctgccagacctcatcagcgatgcccttttc
cgcaccgggcagattgaccgcggctgtgaagttgctttcaccaaagccgacctgcaaggc
cccagtacaacatgccaggaggactcgtgtgccaacatgggtgtgtgcatccagcagtgg
gagaacttcacgtgcgactgctccctgacgtcgtacacagggacccactgcaacgaccct
ggcaccacctacatctttggcaaaggggggggcctgatcacatacacgtggcccagcaac
gagagaccaagcacccggacggatcggctggccgtgggcttcagcaccaccatcaaagat
ggcatcctggtgcggatcgacagcgccccgcgtctgggtgattacatcatgctgcatatt
gaacaaggcaaagtgggcgtgacgttcaacatcgggacggtagacatcagcgtcaaggag
acgaccacgccagtgaatgatggcaagtaccatctggtcaggttcaccaggaacgggggt
aatgccaccttgcaggtggacaactggccgatcaatgagcactttcccacaggcaacagc
gacattgagcgctatcaaatggcaaataagaaaatcccgttcaaatatacccggccagta
gaagattggcttcaggagaaaggccggcagctgacgatcttcaacacgcaggccaccatc
tccatcggcgggaatgaccggaagcggccgtaccagggccagctgtccggcctctactac
aacggcctcaaggtcctcaacatggccgccgagggccacgccaacatccgggtgaacggc
agcgtgaggctggtgggcgacgtgccctccagccggggagcggcccgcaccaccacctcg
gtgccgccggagatgtccaccaccttcatcgagacaaccaccaccctgtccaccaccacc
acccgcaaacagcgctctccacccacggttcagacgacggacgacatcgtctcgtcggcc
gagtgctccagcgacgacgaggacctggaggagtgcgactccggacacacaggaggggag
ctagtcatccccgtgctagtcgaggaccccatagacatcccttctgtatccacccgttca
cccttcatccccctccccccaaccctccgccccgtcctcaccattattgagaccaccaaa
gaatccttggccatggccactgaggcgggggtgccttgcttgtcggaccgaggcagcgat
gatgattgtgatggtggtgatgatggtgatgatgatgatgatgatggcatggtgatttcg
gggtttggctctggcgaagctttcgactctagcctgcccccgactgacgatgaagatttt
tacaccaccttctccctggtaacagataagatcttgaccacatccgcctatgaaggtggc
tacaaagccctcgcacccaagtgggaatccaaggacttgaggcctagcaaagcctcagag
tcaggtaggactacacccacctcgtctctgcccgacaaccggggcacgccgcctgcagcg
gtgccctcagacacgccgcccaagctgcccgcagggaaaatgaacaaccgcgaggtaaaa
cccccgcagccggacatagtcctgctgccgctgcccacctcctttgacctggacggcacc
aagccgcggggccccttcatcacctcccccatgctgcgcaccgtgcccgccgccctgccc
accatgcccaacctggtgcagcgggttcccacggaggtgatccgggagtccagcagcacc
acgggcatggtggtgggcatcgtgtcggccgccgccctctgcatcctcatcctcctctac
gccatgtacaagtacaggaacagggacgagggttcctaccaggtggacgaaacgcgcaac
tacattagcaactcggcgcagaccaatggcgctgtggtgaaggataaagcacccagcagc
agcgccaaaggcagcgccagtagcaagagaccgaaagacaaggacaaggagtattatgta
tag
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integrated database retrieval system