Cololabis saira (Pacific saury): 133418481
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Entry
133418481 CDS
T09849
Symbol
ppfia1
Name
(RefSeq) LOW QUALITY PROTEIN: liprin-alpha-1
KO
K26226
liprin-alpha
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133418481 (ppfia1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133418481 (ppfia1)
Membrane trafficking [BR:
csai04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133418481 (ppfia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIP-1
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
133418481
NCBI-ProteinID:
XP_061563173
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All DBs
Position
2:complement(55114381..55207101)
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AA seq
1281 aa
AA seq
DB search
MMCEVMPTINESEGPGGGRRGSGSPLQSDSEGHFESLMVSMLEERDRLLETLRETQENLG
LTQGKLHEVSHERDSLQRQLNTALPQEFAALTKEVNMCREQLLEKEEEIAELKAERNNTR
LLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRERL
RVALERCSALEEQLTMSHKELAFLREQSGQKRGLADGTSEVNHNSEIGTNGKRASDGSLS
QEDESRPGLGPGLGKELQDVVERQTADLGQMKERTAAMLTRINELEDDLDTARKDLIRSE
DLNTRLQRDLRESMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEVANKDSLFR
QTEDRNRQLQEKLELAEQKLQQTIRKAETLPEVEAELAQRVAALTKAEERHGNVEERLRQ
LEAQLEEKNQELLRARQREKMNEEHNRRLSETVDKLLSESNERLQLHLKERMSALEDKNA
LIRELDHTKKLIEESHHEKEQLLIQIETMRTENEQQQQQQGRSRSNSFLHGRSQMGSTPD
FRFPVSASSLMDSSSDYGSALVLRRPQKGRLAAMRDEPSKVQTLNEQEWERMQQANVLAN
ANVAQAFESDMDASDLEDERDAMFSSVDLLSPAGQADAQTLALMLQEQLDAINNEIRMIQ
EEKESTSIRAEEIEGRVSDGLGGRFRSMSSIPPSLCPGSLTGVPGRSLAGSPPDSGRSTP
RRVPRSPNRELDRMGVMTQPSDLRKHRRKSNQEDKTTIRCETSPPSTPRSMRLNRDGGHA
ASHEDIRDIRGLGGDGGSNPSSSSSSQDSLNKAAKKKSIKSSIGRLFGKKEKGRPANPGR
EPGGPGSGETSGTGSAGTPEADGSPKDGLGGMGTLGGPAEKNRKLQKNPKTGHELLEEAR
RHGLPFAQWDGPTVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPL
HRLKLRLAIQEIMSLTSPSAPPTSRTSTGNVWVTHEEMEHLAATPPTDDDEGSWAQTLAY
GDMNHEWIGNEWLPGLGLPQYRSYFMESLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQC
GVMCLRRLNYDRKELERRREESTLDQQDVLVWSNERVVSWVQSIGLKEYSANLYEHGVHG
ALIALDETFDHNAMALLLQIPTQNTQARAALEREYNGLLGGATDRRMEEEDDKNFRRAPS
WRKKFRPKDVRGGAGGGAMGVGGAMGVGGAMGGADTLPHNFRVTSSGGGASPSSQPKRSL
DGNRWSEDDGEFPAFKTRMTN
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaggtgatgcccaccatcaacgagtccgaggggcccggcgggggccggcgg
gggtccgggtcccccctgcagtcggactcggagggacattttgagtccctgatggtttcc
atgctggaggagagagaccgcctgctggagacgctgagggagacgcaggagaacctgggc
ctgacgcagggcaagctgcacgaggtcagccacgagagagactccctgcagagacagctc
aacacggccctgccccaggagtttgcagcgctcactaaggaggtgaacatgtgccgggag
cagctcctggagaaggaggaggagatcgccgagctgaaggcggagaggaacaacaccagg
ctcctcctggaacacctggagtgtctggtttcccgccacgagcgcagtctgaggatgacg
gtggtgaagcggcaggcccagtccccggccggcgtctccagtgaggtggaggttctgaag
gccctcaagtccctgtttgagcaccacaaggccctggacgagaaggtgagggagagactc
cgcgtggctctggagcgatgcagcgctctggaggaacagctcaccatgtcccacaaagag
ctggcgttcctccgggagcagagcggccagaaacgaggcctggccgacggaacatccgag
gtcaaccacaactctgagatcggcaccaacggcaagcgagcctcggacgggtccctgagc
caggaggatgagtcccggcccgggctggggcccggtttggggaaggagctgcaggacgtg
gtggagcggcagacggccgatctgggccagatgaaggagcgcacggcggccatgttgacc
cggatcaacgagctggaggacgacctggacacggcccggaaggacctgatccggtccgag
gacctgaacacacgtctgcagagggacctgagggagtccatggcccagaaggaggacatg
gaggagcggatcaccaccctggagaaacgatacctggccgcccagcgagaggccacgtcg
gtgcacgacctcaacgacaagctggagaacgaggtggccaacaaggactcgctcttcaga
cagacggaggacaggaaccggcagctgcaggagaagctggaactggccgagcagaagctg
cagcaaacgattcgcaaggccgagacgctgccggaggtggaggcggagctagcacagcgg
gtggccgcgctaaccaaggcggaggagcgtcatggcaacgtggaggagcgcctgcggcag
ctggaggcccagctggaggagaagaaccaggagctgctgagggcccggcagagagagaag
atgaacgaggaacacaacagacgtctgtcggagacggtggacaaactgctgtcagaatcc
aacgagcgcctgcagctgcacctgaaggagaggatgtctgcgctggaggacaagaacgcc
ctgatccgggagctggatcacaccaagaagctgatcgaggagtcgcaccacgagaaggag
cagctgctgatccagatcgagaccatgaggacggagaacgagcagcagcagcagcagcag
ggccggagccggagcaactccttcctgcacggacgctcccagatgggcagcacccccgac
ttcaggttccccgtctcggcctcctccctgatggacagcagctccgactacggcagcgct
ctggtcctccggaggcctcagaagggccggctggcggcgatgcgggacgagccctccaag
gtgcagacgctgaacgagcaggagtgggagcgcatgcagcaggctaacgtgctagccaac
gccaacgtggcccaggccttcgagagcgacatggacgcgtcggacctggaggacgagcgg
gacgccatgttcagctcggtggacttgctgtcgcccgccggccaggccgacgcccagacg
ctggcgctgatgctgcaggagcagctggacgccatcaacaacgagatcaggatgatccag
gaggagaaggagagcacgtccatccgggccgaggagatcgagggccgggtcagcgacggc
ctgggcggccggttccgctccatgagctccatcccgccctcgctgtgtcccgggtccctg
accggggtccctggccggtccctggccgggtcgcccccggactcgggccgctccaccccc
agacgggttccccgcagccccaacagagagctggaccgcatgggggtcatgactcagcct
agtgacctgcggaaacaccgcaggaagtccaaccaggaggacaagaccaccatccggtgt
gagacgtcccccccctccaccccccggtccatgaggctgaacagagacgggggacacgca
gccagtcatgaggacatccgggacatccgcgggctggggggggacggcggcagcaacccc
agcagcagcagcagcagccaggattctctcaacaaagcagccaagaagaaaagcatcaag
tcgtccatcggacggctgttcgggaagaaggagaagggccggcccgccaacccggggagg
gaacccgggggcccaggttcaggtgagacctctggtaccggttcagcaggaaccccggag
gctgacggatcccccaaggacggcctgggggggatgggcaccctggggggcccggcggag
aagaaccgcaagctgcagaagaatcccaagaccgggcatgagctgctggaggaggcccgg
cggcacggcctgcccttcgcccagtgggacgggcccaccgtggtgtcctggttggagctg
tgggtgggcatgccggcctggtacgtggccgcctgccgggccaacgtgaagagcggcgcc
atcatgtcggctctgtcggacacggagatccagagagagatcggcatcagcaacccgctg
caccggctcaagctgaggctcgccatccaggaaatcatgtccctgaccagcccgtcggcc
ccgcccacctccagaacgagcacggggaacgtttgggtcacgcatgaggagatggagcat
ttggcagccacgccccccacggacgacgacgagggcagctgggcccagactctggcctac
ggggacatgaaccacgagtggatcgggaacgagtggctgccgggcctgggcctgccccag
taccggtcctacttcatggagtctctggtggacgcccggatgctggaccacctgaccaag
aaggacctgcggggccagctcaagatggtggacagcttccacaggaacagcttccagtgc
ggggtcatgtgtctgcggagactgaactacgacaggaaggagctggagagacggagggag
gagtccacgctggaccagcaagatgttctggtgtggagtaatgagcgggtcgtctcctgg
gtccagagcatcggcctgaaggaatacagcgctaacctgtacgagcacggcgtccacggg
gcgctgatcgccctggacgaaaccttcgaccacaacgccatggcgctgctgctgcagatc
cccacgcagaacacccaggcccgggcggcgctggagcgggagtacaacggtctgctgggc
ggagccacggaccgcaggatggaggaggaggacgataagaacttccgccgggccccgtcc
tggaggaagaagttccggcccaaggacgtgaggggcggggccgggggcggggccatggga
gtgggcggggccatgggagtgggcggggccatgggcggggccgacaccctcccccacaac
ttcagggtgacgagcagcggcgggggggcgtctccgtcctcacagcccaagaggagcctg
gacggtaaccgctggtccgaggacgatggagaattccccgccttcaagacccggatgacc
aactga
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