Cololabis saira (Pacific saury): 133418483
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Entry
133418483 CDS
T09849
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
csai04054
]
133418483
Pattern recognition receptors [BR:
csai04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133418483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
NOD2_WH
LRR_6
PRY
LRR_1
SPRY
LRR_4
AFG1_ATPase
Motif
Other DBs
NCBI-GeneID:
133418483
NCBI-ProteinID:
XP_061563170
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Position
18:complement(39678316..39700223)
Genome browser
AA seq
1226 aa
AA seq
DB search
MDQCEDREEGVLPSKTSQRGKKRVGESLREEKRRRRRPGLGPGLGSGSGPGPEPGPGPSC
VSLKSDASKDFFISFKDASGFPSERRQPGPGPGPGPGPGPGPSFVSLKSDASKDFFIGFK
DAPGFPSERVDQQISESPSGPSVQQHQTQLDSVFQLLEDDIIMFVKDELKKIQKVLSPDY
PESSDSLEEDGDEEQKSIRETFMEITVKFLRRRKQEKLADLLQSNTVDAVCQSKLKVQLQ
KKYQHVSEGITKAGKTTLLEQIYTELYITEGGTGEVNEEHEVRQIEAASRKPDGAETAIR
QEDIFKPPPGRGGPIRTVMTKGVAGIGKTVLTQKFSLDWAECRTNQDIQFLLPFTFRELN
VLREEKFSLVELVHRFFSETRGICSFEEFQVVFIFDGLDECRLPLDFHTCTILSDPRSST
SVDVLLTNLIRGNLLPSARLWITTRPAAANQIPPYCVSMVTEVRGFTDPQKEEYFRKRFR
EEEKTSRIISHLKTSRSLHIMCHIPVFCWITATVLENVLEKVLETREGGELPKTLTEMYI
HFLVVQAKVKKVKYDGGTETDPHWSPESRKMVESLGKLAFEQLQKGNLIFYEPDLRECGI
DVREASVYSGVFTQIFREESSLYQDQVFCFIHLTVQEFLAALHVHQTFISSGVNLLGDQL
TTHPSSTGFYQTPVDWTLQSPNGHLDFINSGVNLLGDQQKTHPSSTGFYPTAVDWTLQSP
NGHLDLFLRFLLGLSVETNQNLLRGLMTSNQIRSQNNQETIKYIKERISEDLSAERSINL
FHCLNELNDRSLVEQVQQYLGSGSLSTDKLSPAQWSALVFILLSSGDLEVFDLKKFSASE
EALRRLLPVVKASKKVLLSGCNLSGNICPLLSSVLSSQSSSLTELDLSNNDLQDSGLKQL
CPGLESPHCKLESLRLSGCHLSVDICPLLSSVLSSQSSSLTELDLSNNHLLDSGLEQLCP
GLESPHCHLESLRLSGCLISEEGSSSLVSALTSNPSHLRELDLSYNHPGESAGKLRSGLE
DPRWRLDSLRVEPAGQRFLTPGLRKYSCQLTVDTNTVHNKIKLSDDNRKMMFVEDQSYPV
HPDRFDLPQLLCREVLTGRCYWEVQWSRAVSVSVSYRRISRRGNYGDCRFGAKDNSWSLD
CHPGRRYQVLHNNRDTSITSSSPCPDSGRAAVYVDVPAGTLSFYEVVSDRLIHLHTFNTS
FTGPLCAGFGFYWSKSSSASVSLCPV
NT seq
3681 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtgtgaggacagagaggagggagtccttccctccaaaacctcccagaggggg
aaaaaaagagttggagagagtctgagagaagaaaagaggagacgacgtcgtcctggactt
ggacctggacttggatctggatctggacctggacctgaacctggacctggacccagctgt
gtttccttgaagagtgatgcatcaaaagattttttcatcagttttaaagatgcttctggt
tttccttcagagaggagacaacctggacctggacctggacctggacctggacctggacct
ggtcccagctttgtgtccttgaagagtgatgcatcaaaggattttttcatcggttttaaa
gatgctcccggttttccttcagagagagtggaccagcagatctcagagtcccccagtggt
ccgtctgtccagcagcatcagacccagctggactccgtctttcagctgctggaggacgac
atcatcatgtttgtgaaggacgagctgaagaagatccagaaggttctgagtccagattac
ccagaatcctcagacagtctggaggaggatggagatgaagagcagaagagcatcagagag
acattcatggagatcacagtgaagttcttgaggaggaggaagcaggagaagctggctgac
ctcctgcagagcaataccgtcgatgccgtttgtcaatccaaactcaaagttcagctgcag
aagaagtaccagcatgtgtctgaggggatcactaaagcaggaaagacaacccttctggag
cagatttacacggagctttacatcacagagggagggaccggagaggtcaatgaagaacat
gaagtcagacagattgaagcagcttccaggaaaccagatggagcagaaacagccatcaga
caggaagacatctttaaacccccacctggaagaggaggaccaatcagaacggtgatgacg
aagggagtggccggcatcgggaaaacagtcctaacacagaagttcagtctggactgggct
gaatgcagaaccaaccaggacatccagttcctgcttccattcaccttcagagagctgaat
gtgctgagagaggagaagttcagcttggtggaactagttcatcgattcttctctgaaacc
agaggaatctgcagctttgaagagttccaggtcgtgttcatctttgacggtctggatgag
tgtcgacttcctctggacttccacacatgtacaatcctcagtgaccccagaagttccacc
tcagtggatgtgctgctgacaaacctcatcagggggaacctgcttccttctgctcgtctc
tggatcaccacacgacccgcagcagccaatcagatccctccttactgtgtctccatggtg
acagaagtcagagggttcactgacccacagaaagaggaatacttcaggaagaggttcaga
gaagaggagaagaccagcaggatcatctcccacctcaagacatcacggagcctccacatc
atgtgccacatcccagtcttctgctggatcactgctacggtactggagaacgtcctggag
aaagtcctggaaaccagagagggaggggagctgcccaagaccctgactgagatgtacatc
cacttcctggtggtccaggccaaagtgaagaaggtcaagtatgacggaggaactgagacg
gatccacactggagtccagagagcaggaagatggtggagtctctgggaaaactggctttt
gagcagctgcagaaaggaaacctgatcttctatgaaccagacctaagagagtgtgggatc
gatgtcagagaggcttcagtgtactcaggagtgttcacccagatctttagagaggagagc
agcctgtaccaggaccaggtcttctgcttcatccatctgaccgtccaggagtttctggct
gctcttcatgtccatcagaccttcatcagctctggagtcaacctgctgggagatcaacta
acaactcacccttcttcaaccggtttctatcagacacctgtggactggaccttacagagt
ccaaacggacatctggacttcatcaactctggagtcaacctgctgggagatcaacaaaaa
actcacccttcttcaacaggcttctatccgacagctgtggactggaccttacagagtcca
aacggacacctggacttgttcctgcgcttcctcctgggtctttcagtggagaccaatcag
aaccttctacgaggtctgatgacatcaaaccaaataagatcacagaacaatcaggaaact
atcaaatacatcaaggagagaatcagtgaggacctgtctgcagagagaagcatcaacctg
ttccactgtctgaatgaactgaacgatcggtctctggtggagcaggtccaacagtatctg
gggtctggaagtctctccacagataaactgtctcctgctcagtggtcggctctggtcttc
atcttactgtcatcaggagatctggaggtgtttgacctgaagaagttctcagcttcagag
gaggctctacggaggctgctgccggtggtcaaagcctccaagaaagttctactgagtggc
tgtaacctctcagggaacatctgtccacttctgtcctcagttctcagctctcagtcctcc
agtctgacagaactggacctgagcaacaacgacctgcaggattctggactgaagcagctg
tgtcctggactggagagtccacactgtaaactggagtctctcagactgagtggctgtcac
ctctcagtggacatctgtccacttctgtcctcagttctcagctctcagtcctccagtctt
acagaactggacctgagcaacaaccacctgctggattcaggactggagcagctgtgtcct
ggactggagagtccacactgtcacctggagtctctcaggctgtcaggctgtctgatctca
gaggaaggaagttcttctctggtctcagccctgacctccaacccatcccacctgagagag
ctggacctgagctacaaccatccaggagagtcagcagggaagcttcggtctggactggag
gatccccgctggagactggacagtctcagggtggagcctgctggacaacgatttctgaca
ccaggtctcaggaagtattcctgtcaactcaccgtcgacacaaacacagtccacaacaag
atcaaactgtctgatgacaacaggaagatgatgtttgtggaggatcagtcatatcctgtt
catccagacaggtttgatcttcctcagctgctgtgtagagaagttctgacgggtcgctgt
tactgggaggtccagtggagcagagctgtttctgtatcagtgagttacagaagaatcagc
aggagaggaaactatggtgactgtaggtttggagcaaaagataattcctggagtctggac
tgtcatccaggtcgtcggtaccaagtccttcacaataacagagacacatccatcacctcc
tcatctccatgtccagactctggcagagcagcagtgtacgtggacgttcctgctggaact
ctgtccttctatgaagtcgtctctgacagactgatccacctccacaccttcaacaccagc
ttcactggacctctctgtgctggatttggattctactggtccaagtctagttctgcttca
gtctctctgtgtccagtttag
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