Cololabis saira (Pacific saury): 133418611
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Entry
133418611 CDS
T09849
Symbol
capn3b
Name
(RefSeq) calpain-3b isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133418611 (capn3b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
csai01002
]
133418611 (capn3b)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
133418611 (capn3b)
Peptidases and inhibitors [BR:
csai01002
]
Cysteine peptidases
Family C2: calpain family
133418611 (capn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
CAPN13-like_C_EFh
EF-hand_5
Integrase_DNA
Motif
Other DBs
NCBI-GeneID:
133418611
NCBI-ProteinID:
XP_061563381
LinkDB
All DBs
Position
18:20957567..20989995
Genome browser
AA seq
771 aa
AA seq
DB search
MGDETHKGQAPVVEETKVRVLYETEASIEPDGNVDYGLTGANSIYSAILSRNEAVKDAKR
LKTFLELRDKYVKKKVLFEDPLFPADDSSLFYSKKPSMRFEWKRPSEICDNPQFIVDGAN
RTDICQGELGDCWLLAAIACLTLKEKLLYRVIPPDQSFTEHYAGIFHFQFWRYGEWIDVI
VDDRIPTCNNQLIFTKSFRNNEFWSALLEKAYAKLHGSYEALKGGNTLEAMEDFTGGVTE
FFDLNETTKELYSIMKRALERGSLMGCSIDVFSASELESRTDQGLVRGHAYSIIGLQECD
EVSKDTRIRLIRLRNPWGWVLWKGPWSSTSKEWSTISTADHENLKKQTIETSEFWMSFDD
FQLNFTKLEMCNLTPDALQGVERNTWTVSVNEGRWVRGSSAGGCRNFPETFWTNPQYRLQ
LYEEDDDPEEGQVVCTFVVALMQKGRRMQRHIGAKFLTIGFSIYEVPKQMRGQNQHLQKD
FFLYNASKAKCKSYINLREVTERFRLPPGEYVIVPTTFEPHQEGEFILRVFSEKQSSSEE
AENIIESDKTQQDKKKREKPIVFVSDRARANKEIEHDGIQGEKKKKPKQKLLQQDEETEE
EKQFRAIYQQIAGEDMQICANELKMIMKNVLSKHNEITSEGFSLETCRSMIALMDTDGTG
KLNLQEFKHLWKKIKQWQLIFKRYDKDQSCSISSFEMRNAVNDAGFHLNRQLYDIIAMRY
ADEHINIDFDSYICCFVRLEGMFRAFNAFDKDGDGVIKLNVLEWLQLTMYS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacgagacacacaaggggcaagcgcctgttgttgaggaaaccaaggtgagggtg
ctttatgaaactgaagcatctatcgagcctgacggcaatgtcgattacggtcttaccggg
gcaaactcgatctactctgcaattctaagcagaaatgaggctgtcaaagatgccaagcgc
ctgaaaaccttcttggaacttcgagacaaatatgtgaagaagaaggttttgtttgaagac
cctctgttccctgcagacgactcttcccttttctacagtaagaaaccttcaatgaggttt
gaatggaaacgtccatcagagatctgtgacaaccctcagtttatcgtagatggagcaaac
cggacagatatctgtcaaggagagctgggtgactgctggttacttgctgccatcgcttgt
ctgactctcaaagagaagctgctgtacagagtgattcctccggaccagagcttcactgaa
cactacgccgggatcttccatttccagttctggcgttatggcgaatggattgacgtgatt
gtggatgaccgcatccccacctgcaataaccagctgattttcaccaaatccttcagaaac
aatgagttctggagcgcacttttggaaaaagcttatgccaagttgcacgggtcttatgag
gcactcaaagggggtaacacgctggaggccatggaggatttcacaggtggagttactgag
ttcttcgatttgaacgaaacgaccaaagagctctacagcatcatgaagagagcgctggag
agaggctcgctgatgggctgctccatagatgtgttttcagccagtgaactggagtctcgg
actgaccaggggctggtcaggggccacgcctactctatcataggtctccaggagtgtgat
gaggtttcaaaggacacaagaattcgcctgatccgcttgcgcaatccctggggttgggtg
ctctggaagggaccttggagttcaacttcaaaggagtggtcaaccatttccaccgcagac
catgagaatctaaagaaacaaaccattgagacgagtgagttttggatgtcctttgatgat
ttccagctgaattttactaagctggagatgtgcaacctgacccctgatgcgctgcagggc
gtcgaaaggaatacctggacggtgtcggtcaacgagggtcgctgggtcagaggcagctct
gctggcggttgtaggaatttcccagaaacattttggacaaaccctcagtatcggctgcag
ctgtatgaggaggacgatgatccggaggaagggcaggtggtatgcacctttgttgtggcc
ctgatgcaaaagggtcggaggatgcagcgacatataggggcgaaattcctcaccatcgga
ttttccatatatgaggtgccgaagcagatgcgagggcagaatcagcatctgcagaaggac
ttcttcctctacaacgcctccaaagccaaatgcaagagctacattaacctgcgcgaagta
acggagcggttccgcctccctcctggagagtacgtcatcgtccccacgaccttcgaaccc
caccaagagggagagttcatcctcagggtgttttccgagaagcagagctcatctgaggaa
gcagagaacatcattgaatctgacaaaacacagcaagacaagaaaaagagagaaaagccg
attgtgtttgtgtcagaccgagcacgtgccaataaagaaattgagcatgacggcatacag
ggggaaaagaagaagaaaccgaagcaaaaactgttgcaacaggatgaagagactgaagaa
gagaaacagttcagagccatttaccagcagattgctggtgaggacatgcagatttgtgcc
aacgaactgaagatgatcatgaagaacgtactttccaagcataatgaaataacgtcagaa
ggtttcagccttgagacttgccggagtatgatcgccttgatggatactgatgggacaggg
aagctgaacctgcaggagttcaagcatttgtggaagaagatcaagcagtggcagctcatc
ttcaaacgttacgacaaagaccaatcctgctccatcagtagttttgagatgaggaatgct
gttaatgatgcaggatttcacctcaacaggcagttatatgacatcattgccatgcgctac
gcagatgaacacatcaacattgattttgacagttacatctgctgtttcgtgagactagag
ggcatgttcagggcttttaatgcatttgataaagatggagatggagtaatcaagctaaac
gtcctggagtggcttcagctgaccatgtactcgtag
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