KEGG   Cololabis saira (Pacific saury): 133418639
Entry
133418639         CDS       T09849                                 
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
  KO
K14305  nuclear pore complex protein Nup43
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    133418639 (nup43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csai03019]
    133418639 (nup43)
   03036 Chromosome and associated proteins [BR:csai03036]
    133418639 (nup43)
Messenger RNA biogenesis [BR:csai03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     133418639 (nup43)
Chromosome and associated proteins [BR:csai03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    133418639 (nup43)
SSDB
Motif
Pfam: WDR55 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_EIPR1 WD40 Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_SCAP WD_LRWD1 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st EIF3I TFIIIC_delta Beta-prop_WDR75_2nd Beta-prop_DCAF4 KNTC1_N Vgb_lyase
Other DBs
NCBI-GeneID: 133418639
NCBI-ProteinID: XP_061563425
LinkDB
Position
18:11431179..11438821
AA seq 372 aa
MESTTAKYVSQKISKTRWSPVSHSSLQQPDIFATGSWDNEDNKISIWSIGNNGSPSLEDG
FEGDPQLLCEYKHNGDVLDLQFLDQDRIVTASSTGAVTVFRYHQNSQTISVSHSWERAHR
YPCDNAPCTGVVCSSPDIVSVGEDGRIIIFRADQEGVIRVIENADSSTIHAATYLRTTEV
LTVNSIGQLKLWDLRQQSNTPSQILSLSGDRVPLHCVDRHPNQQHIVATGGQDGMLCVWD
VRQGNTPFSLMEAHSAEMWEVHFHPTNPDHLFTCSEDGSLLHWETSSQSEMPSFLQGGRN
NSMISRSAMAPAGGNQSLINTWLSGDTSKGRLETTHMLPSQTLSVNSLDVLGQCLVCGTD
GEAIFVNRQVPV
NT seq 1119 nt   +upstreamnt  +downstreamnt
atggaaagtacaactgctaaatacgtctcccagaaaatcagcaaaacgagatggagccca
gtgtcgcattcttctttacaacaaccagatatatttgctactggctcgtgggacaacgag
gacaacaagatttccatttggtccattgggaataatggcagtcccagtctggaagatgga
tttgaaggagacccgcaacttttatgtgaatacaagcataatggggatgtgcttgacctc
caatttttggaccaagacagaatcgtcacggcatcgtctacaggagcagtcactgtgttc
cgctatcaccaaaacagccagactatctccgtttcccacagctgggaaagagcacaccgt
tacccttgtgacaatgctccttgcacgggtgtcgtctgcagcagtcctgacattgtttct
gtcggagaggatggtaggatcatcatcttcagagccgaccaggaaggagtgatcagagtc
atagagaatgccgacagcagtacaattcatgctgcgacatacctgaggaccacagaggtt
ttgacagtcaactctatcggccaactgaagctgtgggatttgagacaacaaagcaacaca
ccgtcgcagattttatccctgtcaggagatagagttcctttgcattgcgttgacagacac
ccgaatcaacagcacattgtggccacgggtggccaggacggcatgctctgtgtctgggat
gtgagacaaggcaacacgcccttctcacttatggaggcacattcagctgaaatgtgggag
gtccacttccacccaaccaacccagatcacctgttcacctgctcagaggacggctcgctg
ctgcactgggagacttcctcccagtcagaaatgccgtctttcttgcaaggtggcaggaac
aacagcatgatctcccgcagtgcgatggccccggccggggggaaccagtccctcatcaac
acctggctcagtggagacaccagtaaaggccggctggagaccacgcacatgctgcccagc
cagacgctgtctgtcaacagcttggatgtgctgggacagtgtcttgtctgtgggactgat
ggagaagctatttttgtcaacagacaggtcccagtttaa

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