Cololabis saira (Pacific saury): 133418639
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Entry
133418639 CDS
T09849
Symbol
nup43
Name
(RefSeq) nucleoporin Nup43
KO
K14305
nuclear pore complex protein Nup43
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133418639 (nup43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133418639 (nup43)
03036 Chromosome and associated proteins [BR:
csai03036
]
133418639 (nup43)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
133418639 (nup43)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133418639 (nup43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WDR55
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
WD40
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD_LRWD1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
EIF3I
TFIIIC_delta
Beta-prop_WDR75_2nd
Beta-prop_DCAF4
KNTC1_N
Vgb_lyase
Motif
Other DBs
NCBI-GeneID:
133418639
NCBI-ProteinID:
XP_061563425
LinkDB
All DBs
Position
18:11431179..11438821
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AA seq
372 aa
AA seq
DB search
MESTTAKYVSQKISKTRWSPVSHSSLQQPDIFATGSWDNEDNKISIWSIGNNGSPSLEDG
FEGDPQLLCEYKHNGDVLDLQFLDQDRIVTASSTGAVTVFRYHQNSQTISVSHSWERAHR
YPCDNAPCTGVVCSSPDIVSVGEDGRIIIFRADQEGVIRVIENADSSTIHAATYLRTTEV
LTVNSIGQLKLWDLRQQSNTPSQILSLSGDRVPLHCVDRHPNQQHIVATGGQDGMLCVWD
VRQGNTPFSLMEAHSAEMWEVHFHPTNPDHLFTCSEDGSLLHWETSSQSEMPSFLQGGRN
NSMISRSAMAPAGGNQSLINTWLSGDTSKGRLETTHMLPSQTLSVNSLDVLGQCLVCGTD
GEAIFVNRQVPV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtacaactgctaaatacgtctcccagaaaatcagcaaaacgagatggagccca
gtgtcgcattcttctttacaacaaccagatatatttgctactggctcgtgggacaacgag
gacaacaagatttccatttggtccattgggaataatggcagtcccagtctggaagatgga
tttgaaggagacccgcaacttttatgtgaatacaagcataatggggatgtgcttgacctc
caatttttggaccaagacagaatcgtcacggcatcgtctacaggagcagtcactgtgttc
cgctatcaccaaaacagccagactatctccgtttcccacagctgggaaagagcacaccgt
tacccttgtgacaatgctccttgcacgggtgtcgtctgcagcagtcctgacattgtttct
gtcggagaggatggtaggatcatcatcttcagagccgaccaggaaggagtgatcagagtc
atagagaatgccgacagcagtacaattcatgctgcgacatacctgaggaccacagaggtt
ttgacagtcaactctatcggccaactgaagctgtgggatttgagacaacaaagcaacaca
ccgtcgcagattttatccctgtcaggagatagagttcctttgcattgcgttgacagacac
ccgaatcaacagcacattgtggccacgggtggccaggacggcatgctctgtgtctgggat
gtgagacaaggcaacacgcccttctcacttatggaggcacattcagctgaaatgtgggag
gtccacttccacccaaccaacccagatcacctgttcacctgctcagaggacggctcgctg
ctgcactgggagacttcctcccagtcagaaatgccgtctttcttgcaaggtggcaggaac
aacagcatgatctcccgcagtgcgatggccccggccggggggaaccagtccctcatcaac
acctggctcagtggagacaccagtaaaggccggctggagaccacgcacatgctgcccagc
cagacgctgtctgtcaacagcttggatgtgctgggacagtgtcttgtctgtgggactgat
ggagaagctatttttgtcaacagacaggtcccagtttaa
DBGET
integrated database retrieval system