Cololabis saira (Pacific saury): 133418985
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Entry
133418985 CDS
T09849
Symbol
lrrc4bb
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04514
Cell adhesion molecule (CAM) interaction
csai04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133418985 (lrrc4bb)
04517 IgSF CAM signaling
133418985 (lrrc4bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133418985 (lrrc4bb)
Cell adhesion molecules [BR:
csai04515
]
Immunoglobulin superfamily
NGL family
133418985 (lrrc4bb)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
ig
LRR_14
LRR_9
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
LRR_NXF1-5
Ig_6
DUF7617
Big_6
Motif
Other DBs
NCBI-GeneID:
133418985
NCBI-ProteinID:
XP_061563944
LinkDB
All DBs
Position
19:complement(12028786..12041209)
Genome browser
AA seq
739 aa
AA seq
DB search
MRVVMVTSPCTPFPLLWLVQLLLWFHNHGAQLTEAAPSCPTPCTCSNQASRVICTRKSLD
QIPESISENTRYLNLQENAIQVIKSDTFKHLRHLEILQLSKNHIRQIEVGAFNGLPNLNT
LELFDNRLTVVPSQAFEYLSKLRELWLRNNPIETLPAFAFHRVPSLRRLDLGELRKLDFI
SEAAFEGLVNLRFLNLGMCGLKDIPNLTPLVKLEELELSGNQLGIVRPGSFQGLVSLRKL
WLMHSRVSVIERNAFDDLKSLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNCD
VLWLSWWLKETVPNNTTCCARCHAPPGLKGKYIGELDQSHFVCYAPVIVEPPTDLNVTEG
QPAELKCRTGTSMTSVNWFTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYTCMV
TNSAGNTTASAVLNVSASDPSNSYSYFTTVTVETVETIKGEEEDSARQYVNETLLEFPTI
HKGLDGRPGITISPSLSSLSSLSPKANRGTTNAVTESVIDVTNIPGLDDVMKTTKIIIGC
FVAITFMAAVMLVVFYKLRKQHQLHKHHGPARAVEIVNVEDEIGAGAGSGISGGSTMNSG
NGGEGTLRIHHPEIVNLPNIGRTDTLNHYYKAHHFNNNVMGLSIGSDVMGPGGILSKNQH
GQDNPISCTSVPMSTSNLLTTSGNGTNTISSSMSPPLPMSLPMGLHGSIKGFMGQNQNPQ
MEPLLFKGNSKENVQETQI
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgttgtcatggtgaccagcccctgtacccctttccccctcctctggttggtccag
cttttgttgtggtttcacaaccatggagctcagctgacagaggcagcaccctcatgtccc
accccttgtacctgctccaaccaggcgagccgtgtcatctgtacaaggaagagcttagat
caaatcccagaaagtatttcagaaaacacaagatacctcaatctacaagagaacgcaatt
caggtgatcaagtctgacacatttaaacatctgcggcatttggaaattctgcagctctcc
aagaaccacatccggcagattgaggtgggagctttcaatggtctgcccaacctcaataca
ttggagctttttgacaaccgtctcacagtggtaccatctcaagcctttgagtacctcagc
aagctaagggaactatggctaagaaacaatcccatcgaaacactgccggcctttgccttt
catcgtgttccctctttaagacgtcttgatctaggggaactcaggaaactggatttcatc
tcggaggcagcctttgaaggtctggtaaatttgcgctttttgaatcttggcatgtgtggc
ttaaaggacatccctaatctcaccccactggtgaaactagaagaattagagctgtcaggt
aaccaactagggatcgtccggcctggatccttccagggcctcgtgtcacttcgcaagctg
tggctaatgcactcacgggtgtcagtcattgaacgcaacgcttttgacgacctcaaaagc
ttggaagagctcaacctctcccacaactctttgcattcccttccccatgatctctttact
cctttgcatcagttggagagggtgcatctcaaccataacccatgggtttgcaactgtgat
gtcctctggctgagctggtggctgaaagaaacagttcccaacaacacaacatgttgcgct
cgttgccatgctcccccaggtctgaagggcaagtacattggagaattagaccagagccat
tttgtctgttatgccccagtgattgtggagccacccactgacctcaatgtcactgaaggc
cagcctgctgaacttaaatgtcgtaccggaacctcaatgacctctgtgaactggttcacc
ccaaatggcactctgatgacacacggatcataccgagttaggatctccgtgcttcatgac
ggaacgctgaacttcacaaatgtgaccgtgcaggacactgggcagtatacttgcatggta
accaactctgctggaaacaccactgcatctgctgtgctcaatgtctcggcctctgatccc
agcaacagctacagctacttcaccaccgtcactgtagaaacagtagaaacaataaaggga
gaggaagaggattcagcaagacagtatgtaaatgagaccctcctagagttccctacaatt
cataaaggattagacggcagacctggtatcactatatcaccatctctctcatctctttcc
tcactttcacccaaagctaaccgaggaactacaaatgcagtgacggaatcggtaattgat
gtaactaacattccaggcctggatgatgtcatgaaaacaaccaagatcatcattggttgt
tttgtggctattacgtttatggcagctgtaatgttggtggttttctataaactccgtaag
caacaccagctacacaagcatcatggccctgccagagctgttgaaattgtcaatgtagag
gatgagattggagctggggccggaagcggcatctcaggtggttcaacaatgaattctgga
aatggtggcgagggaaccctaaggatacatcatccagaaatagtcaaccttcccaacatt
ggtcgtacagataccctcaaccattactacaaggcacatcattttaataacaatgtgatg
ggtcttagcatcggctctgatgtaatgggaccaggtgggatcctcagcaagaaccaacat
ggccaggacaaccccatctcctgtacctcagtcccaatgtctacatctaatttgctcacc
acatcaggcaatggcaccaacaccatctccagttctatgtccccgccactgccgatgtct
ctccccatgggcttacatggatcgatcaagggtttcatgggtcagaaccagaatccccaa
atggagcctcttctcttcaaggggaactcaaaggaaaatgtccaagagactcagatctaa
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