Cololabis saira (Pacific saury): 133419043
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Entry
133419043 CDS
T09849
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133419043 (mms19)
03400 DNA repair and recombination proteins [BR:
csai03400
]
133419043 (mms19)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
133419043 (mms19)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
133419043 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
HEAT_2
RTP1_C1
TOR1L1_N
HEAT_EZ
PORR
API5
Motif
Other DBs
NCBI-GeneID:
133419043
NCBI-ProteinID:
XP_061564022
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All DBs
Position
19:24501857..24520030
Genome browser
AA seq
1027 aa
AA seq
DB search
MAADSSLLLALVEEFVSGLQDSKAKDAAKGLKDGQFTILQLVEALGLSLTSSQPHTRARG
VQLLSEVLQEKYEDLTQREVEVLLAFYENRLKDHYVVTPPVLRGLQVLTKCNKLPPGSAV
SMLRSLFQDVHVQSLMLAERACVYNMLINLMETREAELKGLGADFVFGFVQSMDGERDPR
NLLLAFQIAKNITVRGYDLGKFTEELFEVTSCYFPIDFNPPANDPHGITKEELIRALRAV
LTGTPQFAEFLLPLLIEKLDSDVQSAKLDSLQTLTAGVQQYEHKDLAEFLEGLWASLRRE
VFQTSSEKIESAALAALIALTSCLSRSVLNSDSEDSLSSFLDLVLKDCRHHLCEPDLKLV
WPSAKLLQASCSASNRASHIVAAAVMPSLIEQYNNRTQCSHRRTLLEVSQRFLQSVKTGQ
SSESEESVFSAYRDSLCSMVFSALAESNSSLQITAASVLTSLAQQTGLLSDSDVEVAVDH
LTRLLLTDEDERVSVSVVECAGALAELQPAAFVTRMIPKLKEEMFTVQDNRDVSELHSHH
AVRQRCLSALAAVSIQPSIIQESTPVILEVLSSAHTGSVGFSVDEVVLACRSLQKIAEQV
RDTEETGQCFHDVIIPRLLSLALQAALQGERSSGHHSLLVEEVFLSALVPVISTSCSRLQ
PMLAEKTASRAVSLFLDGDVSFLPDNSFPSNIKLLKDQRGESWSQSQLVCLLMGCVCSLP
RSVDVPQMEQLLTQLEEMSCTCSHRLSYASAAKCFAGLINKRPHGESLDSLIQRTMKRVC
RELDCTSSPVRTQAFTLLIWVAKALLLRYHPLFTALTDKLFSLLDDADLGPMAADGFSLL
MSDSPDVLNRSCHADVRIMYRQRFFSENSAKLVQGFNAAPQEKKPNYLKALSNIVNKLPK
QVQVTELPALLSLLLEALTCPDQGVQLSTLSCLEPVLVNPPTVLIQQLEALVNRLTALVC
SPVMTVRIASIRCIHAVSSFPVHEVLPFRARVLRALAPPLDDKKRLVRREAVQARAEWFL
VGSPGGR
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggacagttccctgctgctggcgctggtggaggaatttgtctccggactccag
gacagcaaggcaaaggatgcagcaaaaggtctcaaagatggacagtttacaatactgcag
ttagtggaagcactaggactcagcctgaccagctctcagcctcacacccgagcccgggga
gtccagctcctctctgaagtcttacaggagaagtatgaggatctcacacagagagaagtg
gaagtgctccttgccttctatgaaaaccgcctgaaggaccattatgtcgtcacgccgcct
gttttacggggactgcaagtactgacaaaatgcaacaagttgcctcctggctcagctgtg
tcgatgctgaggtctttgtttcaggatgttcatgtacagtcgctgatgcttgcagagaga
gcgtgcgtctacaacatgctcatcaacctcatggaaaccagagaagcagagctgaagggg
ttaggagccgactttgttttcgggttcgtccaatccatggatggagagagggatcctcgc
aacctcctgttagcctttcagattgccaaaaacatcactgtcagaggatacgatctcggt
aaattcacagaggagctgttcgaggtgacgtcctgctatttccccatcgatttcaaccca
cccgccaacgatcctcacgggatcaccaaggaggaactgatccgggcgctgagggccgtc
ctcacggggacgccacagtttgctgagtttctgttgcctctcctcatcgagaagctggac
tcagatgttcagagtgcgaagctggactcgctgcagacgctgaccgctggggtgcaacag
tatgaacacaaggacttggctgaattcctcgagggactgtgggcgtcgctgcgccgagag
gtgttccagacatccagcgagaagatcgagtcggcagccctcgctgcgctcatcgcgctc
acttcctgcctttctcgctcagtcctcaactccgactctgaagactccctcagctccttc
ctggatcttgttctcaaagactgcagacatcatctgtgtgagcccgacttgaagctggtg
tggcccagcgccaagctgctgcaggcgtcctgcagcgcctccaacagggcgagccacatc
gtagcggcggccgtcatgccctcgctcatagagcagtacaacaaccggacgcagtgttcc
cacagacggacgttgctggaggtgtcacagcgattcctccagtcggtaaaaaccggccag
tcttcagagagcgaggagagtgtgttttcagcctacagagattctctgtgcagcatggtg
ttttcagctctggctgagagtaattccagcctgcagatcactgcagcctctgtgctcacc
tcactggcgcaacagacgggtctcctgtcagactctgatgtggaggttgctgtggatcat
ctgaccagactgctgctgacggatgaagatgagagagtcagtgtctctgtggtggagtgt
gctggagccttagcagaactgcaaccggccgccttcgtcactaggatgatcccaaaactg
aaggaggaaatgtttactgttcaggacaacagagacgtttcagagttacattcccatcat
gcagtgcgacagcggtgcttgtctgctttggctgcggtgtccatccagcccagcatcatc
caggagagcacacctgtcatcctggaggtcctcagctcagcacatacaggcagcgtcggt
ttctccgtggacgaggtggtgctggcgtgccgcagccttcagaagatagcggagcaggtt
cgagacaccgaggagacggggcagtgtttccatgacgtcatcatcccccgcctgctgtct
ctggcgctgcaggcagcgctgcagggtgagaggtcgtctggtcaccacagtctgctggtg
gaggaggtcttcctgtctgctctggttcctgtcatcagcacttcctgctccaggctgcag
cccatgttggcggaaaagacggcgtcgagggctgtctctctcttcctagatggtgatgtc
tccttcctgcccgacaactccttcccttcaaacatcaagttgctgaaggaccagcggggg
gagtcatggagtcagtctcagctggtctgtctgctcatgggctgcgtgtgctcgttaccg
cgcagcgtggatgtgccccagatggagcagctgctgacacagctggaggagatgagctgc
acctgcagccaccggctgtcgtacgcgtctgctgcaaagtgcttcgctggtctgatcaac
aaaaggcctcacggtgaatctctcgacagcctaattcagaggacgatgaagagagtgtgc
agggagttggactgcacttcctcccccgtgcgcactcaggccttcacgcttctgatctgg
gttgccaaggctctgctcttgcgataccaccctctgttcacagctctgactgacaagctc
ttctctctgctcgacgatgccgatctgggtccgatggcagcggacggcttctctctgctg
atgagcgactctcctgatgtcctgaaccgcagctgccacgctgacgtgcgcatcatgtac
cgccagcgcttcttcagcgagaattcagccaagctggtgcagggcttcaacgctgcgccg
caagagaaaaagcccaactacctgaaggctctgtcaaatatcgtcaataaactaccgaag
caggttcaagtcaccgagctaccagcgttactttctctgctcctggaggccttgacgtgt
cccgaccagggcgtccagctgtccacgctgtcctgtctggagcccgtcctcgtcaacccc
ccaacagtcctcatccagcagctggaggccctggtcaaccggctcacggccctcgtctgc
agcccagtcatgactgtgagaattgcttcaatacgctgcatccacgccgtctccagcttc
cccgtacatgaggtcttgccgtttcgggctcgagtgctgcgagcgttggccccacctctg
gatgacaagaagaggctggtgaggagagaagcagttcaggcccgagcagagtggttcctc
gtaggaagtcctggaggaaggtga
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