Cololabis saira (Pacific saury): 133419147
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Entry
133419147 CDS
T09849
Symbol
bbs1
Name
(RefSeq) Bardet-Biedl syndrome 1 protein
KO
K16746
Bardet-Biedl syndrome 1 protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csai03037
]
133419147 (bbs1)
Cilium and associated proteins [BR:
csai03037
]
Primary cilia and associated proteins
BBSome
133419147 (bbs1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BBS1
GAE_BBS1
PHTB1_N
Beta-prop_BBS7
Beta-prop_LRRK2
Beta-prop_IFT122_2nd
Motif
Other DBs
NCBI-GeneID:
133419147
NCBI-ProteinID:
XP_061564145
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All DBs
Position
19:6458122..6469719
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AA seq
583 aa
AA seq
DB search
MSSGDSGGDAGRWLDAHYDPVAGLYTFSSCVDLADLSGDGENRLVVGDLGNGSSGMKLKV
YRGTALLSESALLDLPAGLVAFFMDLHEPRIPAVAVASGPCIYVYKNLRPYFKFTLPGLE
VNALEQDVWQQVKEGQIDPATLKEMLEGIRRNADVPLSVRSIRFLALDDHDAEEFVQLHK
QQPIRRQTVITCIGTLKKSTADEDGVSCLVIGTENGDVLILDPEAFIVLSKMSLPGTPTM
MDVTGQFDVEFRITVACRNGNIYILRRDSDRPRYCVELPSHPVGLVRVGKNVVVGCSDDS
LQGFTQKGKKLWRIELPAPITTMAVMELPTRGFQAVLVGLANCEVHLYRDKNLLSTIKTP
DAVTSIRFGRYGREDGTLVLTTGAGGLMVKILKRTAVFDERDSAPGPPPAQSIRLNVPKK
TKLYVDQTLRERENGTAMHRAFQMDLSRLRLAAATAYVKALESSLTPMSASLAEPLKMNA
VVQGLGPTFKLTLNIQNTAACRPVMNLAISFLYNDGLYRMRNPFMRIPLLVPGLVYPVET
FVECTSDKGISDIIKVFVLREGQSTPLLTAHINMPVSEGLTLN
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccggggattctggcggggacgcgggtcggtggctggacgcccactatgacccg
gtggccggtctctacaccttctcgtcctgcgtggacctggcggacctgagcggggacggg
gagaaccggctggtggtgggggacctgggcaacggctccagcgggatgaagctgaaggtg
taccggggcacggctctgctcagcgagagcgccctgctggacctgcccgccggcctcgtg
gccttcttcatggacctgcacgagccccgcatccccgccgtcgccgtggcgtccgggccc
tgcatctacgtctacaaaaacctgcggccgtacttcaagttcacgctgccgggtctggag
gtcaacgccctggagcaggacgtgtggcagcaggtgaaggaggggcagatcgaccccgcg
accctgaaggagatgttagagggcatcaggaggaacgccgacgtcccgctgtccgtccgc
tccatccgcttcctggcgctggacgaccacgacgccgaagaattcgtgcagctgcacaaa
cagcagccaatcaggcggcagaccgtcatcacctgtatcgggactctgaagaagagcacg
gccgacgaagacggcgtcagctgcctggtgatcggtactgagaacggcgatgtcctcatc
cttgaccccgaagctttcatcgtcctctctaagatgtccctgccgggtactccgaccatg
atggacgtgacggggcagttcgacgtggagttccgcatcactgtggcgtgtcgcaacggg
aacatctacatcctgcgcagggactccgacaggcccaggtactgcgtggagctgccgtcc
cacccggtggggctggtgcgggtcggcaagaacgtggtggtgggctgcagcgacgacagt
ctgcagggcttcacacagaaggggaagaagctgtggaggatcgagctgccggcccccatc
accaccatggccgtcatggagctgcccacccggggcttccaggccgtcctggtgggcctg
gccaactgcgaggttcacctgtaccgggacaagaacctgctgagcaccatcaagacaccc
gacgccgtcaccagcatccgcttcggccgctacggccgcgaggacggcaccctggtcctg
accaccggcgccggcggcctgatggtgaagatcctgaagaggacggccgtgttcgacgag
cgcgacagcgcgcccgggccgccgcccgcccagagcatccgcctcaacgtccccaagaag
actaagctgtacgtggaccagacgctacgggagcgcgagaacggcacggccatgcaccgc
gccttccagatggacctgagccgcctgcggttagccgccgccacggcctacgtgaaggcg
ctggagtccagcctcacacccatgtccgccagcctcgccgagcccctcaagatgaacgcc
gtggtccagggtctgggtcccaccttcaagctgaccctgaacatccagaacacggcggcg
tgccggcccgtcatgaacctggccatcagcttcctgtacaacgacggcctgtacaggatg
aggaacccgttcatgaggatccccctgctggtccccggcctcgtctaccccgtggagacc
ttcgtggagtgcaccagcgacaagggcatctctgacatcatcaaggtgttcgtgctgcgc
gaggggcagagcacgccgctgctgacggcccacatcaacatgcccgtgagcgaaggactg
actctcaactga
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