Cololabis saira (Pacific saury): 133419183
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Entry
133419183 CDS
T09849
Name
(RefSeq) transmembrane channel-like protein 3
KO
K21988
transmembrane channel-like protein
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
133419183
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
csai02000
]
133419183
03037 Cilium and associated proteins [BR:
csai03037
]
133419183
Transporters [BR:
csai02000
]
Other transporters
Pores ion channels [TC:
1
]
133419183
Cilium and associated proteins [BR:
csai03037
]
Other cilia and associated proteins
Stereociliary proteins
133419183
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
Orf78
Motif
Other DBs
NCBI-GeneID:
133419183
NCBI-ProteinID:
XP_061564201
LinkDB
All DBs
Position
2:2584786..2645410
Genome browser
AA seq
1147 aa
AA seq
DB search
MTTGSEPLVGSSKSFSAAKRHKSIRKTSRRIYSAYQDHQDGSSEDEGKDGERVDSNDPEE
MFQNIQYQKEIIANIRTRPWPMRRKLKVLKQAREIVLGYEGRLTRTRGYQTAGADLLKKL
SRLLYNVVVLFIPWEVRIKKIESHFGSGVASYFIFLRWLFGINIVLTIMTGAFVVLPELL
AGAPFGTTRSKTIPKEHLASAQDLDTIWSLGGYLQYSVLFYGYYGRLRKIGSAGYRLPLA
YFLVGMAVFAYSFIILLRRMAKNSRLSMASASDENFTFCWRVFCAWDYLIGNPEAAESKG
AAIVNNIREAIVEEQQKKKETSLAVLISLRILANILVLLSLAGSIYIIYFVVDRSQKLEQ
EKPELTLWEKNEVSVVVSLITMIAPSAFELVAQLEMYHPRTSLRFQLARVLVLYLGNLYS
LIIALLDKVNSMSSAIQVSPGNWTDSSSFLATIAQPEADTPSTLMSEISEHHNTTVATIT
TVSFTSRSSSRTFYNQTALFEKTARSQQDPCWETYVGQEMLKLSIIDMIFTVASILLIDF
IRGLVVRYLSDCCCWDLESKFPEYGEFKIAENVLHLIYNQGMIWMGAFFSPCLPAFNVLK
LIGLMYLRSWAVLTCNVPHQQVFRASRSNNFYLAMLLFMLFLCMLPTIFAIVRYKPSQHC
GPFSGQEKIYDIISETVESDFPLWFSMVMSYITSPVVVLPALLLLFMLIYYLQAIARSLK
FTNNQLRMQLQTERTEDKKKVFQLAAARLQAPEAAAEEPPDRPQSDATSQEVSVHTPSPR
RNGSVTNFQSPVHHGNSIRTITQSASRADLNAGTGSVRSPAVTILPKRGSEHATNSRPRP
FPGGCGGACRSKPSRQTVYYSDSIHSDPLYRKTVRSLHPVESAGIIAAQSYGGRRGQATR
YVIVNEREPRRKLLRSTTRIPRHYVMEEPAEILELYPRNVRRYAPRAAHLHPHPHRSHTS
QHLLPTADDDGPRTESRRTSVGKSHRPRSLSDLQQQTHFYIGDHVDPTVHGRREDEEDKG
KRGVDWRDPDAPCPSQDAVRAAEPLVVRTRHCVHSPGRPGLSQSRTRQAESYVKRKSRPK
LEKPLTESDSASVASSSDQQNSSTDQYIQVIHNKERHLKSEGPRQDRPAKTKSRTNFESS
DLVCSNV
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgggctctgagcctctggtggggagcagcaagtccttttctgcagccaagagg
cacaagagcatccgcaaaacctccaggaggatttattcagcctaccaggaccaccaggat
ggctcctcggaggacgagggtaaagacggggagcgggtggacagcaatgaccccgaggaa
atgttccagaacatccagtaccagaaggagatcatcgccaacatcaggaccagaccctgg
ccgatgagacgcaagctcaaagtcctcaagcaggctagagagattgtcctgggctacgag
ggccggctgacgagaaccagaggctaccagaccgccggagctgatctgctgaagaagctg
tcccgactgctctacaacgtcgtcgtgctcttcattccctgggaagtgaggatcaagaaa
attgaaagtcactttggctcgggcgtggcctcctacttcatcttccttcgctggctgttt
ggcatcaacatcgtcctcaccatcatgaccggagccttcgtcgttctcccagagcttctg
gctggagcaccgtttggaacaaccagaagtaaaaccatccccaaagagcacctggcctcg
gctcaagacctggacaccatctggtctctcgggggctacctgcagtactccgtcctgttt
tacggctactatggtcgcttgaggaagattggcagtgcggggtaccggctgcctctggcc
tacttcctggttgggatggctgtcttcgcctacagtttcatcattctgctacggagaatg
gccaagaattcccgtctgagcatggccagcgcctccgacgagaacttcacgttctgctgg
agagttttctgtgcctgggattacctcatcggaaacccagaagctgcagagagcaaagga
gctgccatcgtcaacaacatcagggaagccatcgttgaagagcagcagaagaagaaggag
accagcttggcggtcctgatcagtctgcggatcctggccaacatcctggtgctgctgtcc
ctggccggcagcatctacatcatctactttgtggtggaccggtcccagaaattggagcag
gagaagccggagctgacgctgtgggagaaaaacgaggtgagtgtggtggtttccctcatc
accatgattgccccgtctgcctttgagctggtggctcagctggagatgtaccatccgaga
acgtcactgcgattccagctcgccagagtgctggtcctgtacctgggaaacctctacagc
ctcatcatcgccctccttgacaaagtcaacagcatgagctctgctatccaggtgagtcct
ggtaactggacggactccagctccttcctggccaccatcgctcagcccgaggcagatacc
ccctcaacactgatgtcagagatctcagaacatcacaacaccaccgtagcaaccatcacc
acggtgagcttcaccagcaggagcagctccaggaccttctacaaccagacggctctgttt
gagaagacggcccgttctcagcaggacccgtgctgggagacctacgtgggacaggagatg
ctgaagctttccatcatcgacatgatcttcacagtggccagcatcctgctcatcgacttc
atcagggggctggtggttcggtacctgagcgactgctgctgctgggatttagagagtaaa
tttcctgaatacggagaatttaaaatagcagagaatgtcctgcatttgatctacaaccag
ggaatgatctggatgggagcgtttttctctccttgtcttcctgcctttaatgtgctgaag
ctgattggtctgatgtacctgaggagctgggccgtcctcacctgtaacgtgccccatcag
caggtcttcagagcatccaggtccaacaacttttatctggcaatgctgctcttcatgctc
ttcctgtgcatgctgcccaccatcttcgccatcgtcagatacaaaccctcccagcactgt
ggacccttcagtggacaggagaagatctacgacataatctccgagaccgtagaaagtgac
ttcccgctgtggttcagcatggtgatgagttacatcaccagtccagtggtggtgctgcca
gcgctgctgctgctgttcatgctcatctactacctgcaggccattgccaggtcgctcaaa
ttcaccaacaaccagctgaggatgcagctgcagacggagcgtactgaggacaagaagaag
gtcttccagctggctgcagccagactccaggctccggaggctgcagcagaagagccgccg
gaccggccgcagagtgacgccaccagccaggaggtgtccgtccacaccccgtcccccaga
cgcaacggcagcgtcaccaacttccagtcccctgttcaccatggcaacagcatccgaacc
atcacccagtcggcgtccagggccgacctgaatgcaggaactggctccgtcaggagtcca
gcggtcacaatactgcccaaacgcgggtcggaacatgcaactaacagcaggcctcgaccg
tttcccggtggctgcggcggtgcctgcaggtccaagccctcccgccagacggtgtactat
tctgacagcatccactctgaccccttgtacaggaagaccgtccgctctctccatcccgtg
gagtccgccgggatcattgctgctcagagctacggcgggcggcgcggccaggccacgcgc
tacgtgatcgtcaacgagcgcgaaccccgcaggaagctgctgcgctccaccacgcgcatc
ccgcgccactacgtgatggaggagcctgcggagatcctggagctgtacccgcgcaacgtg
aggcgctacgccccccgcgccgcccacctccacccgcatccccatcgctcccacacatcc
cagcacctcctccccaccgccgacgacgacggaccgagaacggagagcaggaggacgtcg
gtggggaaaagccatcggccccgctcgctctccgacctccagcagcaaacgcacttctac
atcggagaccacgttgatcccaccgtccacggaagacgtgaagatgaagaggacaagggg
aagagaggggtcgactggagagatccggatgcaccttgtccgtcgcaggatgccgtgaga
gctgccgagcctctggttgtgcgaacgcgccattgcgtccattccccgggcagaccaggt
ttgtcccagtccagaaccagacaagccgagtcctacgtgaagcgcaagtccagacccaag
ctggagaaacctctgacggagtcggactctgcgtccgtggcctccagcagcgaccagcag
aacagcagcaccgaccagtacatccaggtgatccacaacaaggagcgccacctcaagtcc
gaagggcccaggcaggaccggccggccaagaccaagtccaggaccaatttcgagtccagc
gatctcgtctgctctaacgtctga
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integrated database retrieval system
