Cololabis saira (Pacific saury): 133419203
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Entry
133419203 CDS
T09849
Symbol
smarcd2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133419203 (smarcd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133419203 (smarcd2)
03036 Chromosome and associated proteins [BR:
csai03036
]
133419203 (smarcd2)
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133419203 (smarcd2)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133419203 (smarcd2)
PBAF complex
133419203 (smarcd2)
GBAF(ncBAF) complex
133419203 (smarcd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
133419203
NCBI-ProteinID:
XP_061564218
LinkDB
All DBs
Position
19:complement(36746945..36764727)
Genome browser
AA seq
501 aa
AA seq
DB search
MASRGGFPGHPSPVSAALSAGMRLSGLPQPPAGYRGMGHYTQRPGMPPNRGGGPMGLMGG
QLPGPSYGGGNIPMRPGMGSPGMDASRKRFLHQQHQHQQQQQQQQQQEALGSLRRGAKRR
KMSDKVLPQRIRDLVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPIMQKRKLRIYI
SNTFTPSKPDGEEAEKVSSWELRVEGKLLEEAGKQKRKFSSFFKSLVIELDKELYGPDNH
LVEWHRMPTTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAS
IMQALWLYIKNNKLQDCHEKEYINCNRYFKQIFACLRMRFSEIPMKLAGLLQHPDPIIIN
HIISVDPTDQKKTACYDIDVEVDDPLKGQMNSFLSSTTNQQEIAALEMKIHETIEYINQL
KTERDFMLSFSNNPQDFIQDWLKSQSRDLKLMTDVTGNPEEERRADFYQAPWMPEAVGRY
VYSKVQQRRQELEQVLGIRLT
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgagaggggggttcccggggcacccgagccccgtgagcgcggctctctccgcg
ggcatgaggctgtccgggctcccgcagcccccggccggctaccggggcatgggccactac
acccagcggcctgggatgccacccaacagaggagggggccccatggggttaatggggggc
cagttgcctggtccctcttatggtggaggcaacattcctatgcggccaggcatgggatcc
cctggcatggacgcctcaaggaaacggttccttcatcagcagcatcaacaccagcagcag
cagcagcagcagcagcagcaagaggcgctggggagcttgagacgaggagcaaaaagacgc
aagatgtctgacaaggttctgccacagaggatccgagacctggtccctgagtcacaggcc
tacatggatctcctggcctttgagaggaaactggatcagaccatcgcccgcaagcgcatg
gagattcaggaggccatcaagaagcccattatgcaaaagcgcaagctgaggatctacatt
tccaacactttcactcccagcaagcctgacggagaagaggcagagaaggtttcttcctgg
gagctgagggtggaaggcaaactgctggaggaagccggcaagcagaagaggaagttctcc
tcttttttcaaaagcctggtgattgagcttgataaggagctctatggacccgacaatcac
ttagtagagtggcatagaatgccgaccactcaggagacggatggtttccaggtcaaaagg
cccggggacgtgaacgttaaatgcactcttctgctcatgctcgaccaccagcccccgcag
tacaaactggacccccgcctggctcgtcttctgggcgtgcacactcagacgcgggccagc
atcatgcaggctctctggctctacatcaagaacaacaagctgcaggactgtcacgagaag
gagtacatcaactgcaaccgctatttcaaacagatcttcgcctgtctgcgcatgaggttt
tctgagattcccatgaaactggctggcctgctgcagcacccagaccccattatcatcaat
catatcatcagtgtggaccccacggatcagaagaagacggcatgttatgacatcgatgtg
gaggtggacgaccctctgaaaggccagatgaacagcttcctgtcctccacaaccaaccaa
caggaaattgctgctctcgagatgaagattcatgaaacaattgagtacatcaaccagttg
aaaactgagagagacttcatgctgagcttcagcaataatccccaggacttcatccaggac
tggctgaagtctcagagcagagatctgaagttgatgacagatgtgaccggaaacccggaa
gaggagaggagggctgatttctaccaggcaccctggatgccagaggctgtgggcagatac
gtttactccaaagtacagcagaggcgacaagagttggagcaagtgttgggaatcagactc
acctaa
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integrated database retrieval system
